Protein

View in Explore
Genbank accession
WGG14460.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MVTKTVIPADITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVNDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGPISDDVWVSDVRQRGKYSTGDGTTTFRVPDRNGVQLNSIKGLFAHGDGGGDAGQAGSISEAAAPNITGSFPGAIAGAYESAINRYSSRFGLNGAIGAENGLGVGRDGLNKSGAILTPDNTYGFSFDASVADPVYGRYGIKGTIIPNSFIGVWVIRASGGFVAANTSWSVKNSDKSTPPQNTSVRGGEVVSEYSNPAGKQFARMYSNSVWGSANAAVIEAEGSTRHSYKFYENGTVDFRQSGRVNTFHMNTPMGIWNDATEALMNNLTTNGMNRVAIASGSDALVSGYSIGGYRPNGYPTKVGYHMYLPRNNAFGIACVTIGGDNGKFCRYFLDIDGQIYGGTDYGNFSYTKNGASDARVKHDISPVGVEKSYSNIQGLEFVEFIYNNDEQERVRHGVIAQQAETVEPLYVKTRKYVGLNPGEIVEQKELDTTPMLLDTMHVVQSLMLKIEAMEAEIAELKAGK
Physico‐chemical
properties
protein length:586 AA
molecular weight: 63292,75090 Da
isoelectric point:5,63402
aromaticity:0,09556
hydropathy:-0,36177

Domains

Domains [InterPro]
Coil
Unmapped
11–31
Coil DC_1985
DC_1514
STR
15–165
DC_1514 IPR030392 Coil
WGG14460.1
1 586
Architecture
STR
RBD
STR 15-165 | RBD 281-586
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGG14460.1
1 586
Domain Start End Length (AA) Confidence
N-terminal 1 336 336 0,2718
Central domain 337 535 200 0,1239
C-terminal 536 586 50 0,9940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-336
Central
337-535
C-terminal
536-586

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage phC11
[NCBI] 		3038309 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGG14460.1 [NCBI]
Genbank nucleotide accession
OQ680480.1 [NCBI]
CDS location
range 1868 -> 3628
strand +
CDS
ATGGTAACTAAAACAGTAATTCCTGCGGATATTACAAAACTTAAAAATGAGTCACTTAACAAGAATAATAACTTAAGTGACCTAGCAGATCGCGCAGCTGCGTGGCTAAATGTTCGTCCTATTGGATCTACTCCCCTTGCGGGAGACCCTGTTAATGATTATGATGCTGTAACTAAGCGTTGGGTAGAAAATAAGATTAATACTGGTACAGTTGGACCCACCATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAGCCATACGAAGTCGTTTCTGACGGACAGCTCCTTAATAGGGCTGATTGGCCTGAACTTTGGGCGTATGCACAAATGGTAGGTCCAATTAGTGATGACGTTTGGGTGTCCGATGTAAGACAACGTGGGAAATATTCTACGGGAGATGGTACCACTACTTTCCGCGTCCCAGATCGTAATGGTGTGCAACTAAACTCAATCAAAGGGTTATTCGCTCATGGTGACGGTGGGGGGGATGCTGGTCAAGCTGGTTCAATATCAGAAGCTGCAGCACCCAATATTACCGGTAGTTTTCCTGGTGCTATTGCTGGTGCGTATGAATCCGCAATTAATAGATACTCATCAAGATTTGGTCTTAATGGTGCGATCGGTGCTGAAAATGGATTAGGTGTTGGTAGGGATGGGTTAAATAAATCTGGCGCTATACTTACACCGGATAATACATACGGATTTAGTTTTGATGCAAGCGTAGCTGACCCTGTTTATGGGCGTTATGGAATAAAAGGTACTATTATTCCAAACAGCTTTATAGGTGTATGGGTAATCCGCGCTTCTGGCGGGTTTGTTGCTGCAAACACATCCTGGAGCGTTAAGAACTCGGATAAGAGCACACCTCCGCAGAATACCTCCGTTCGCGGTGGTGAAGTAGTATCGGAATACTCCAACCCAGCAGGTAAGCAATTCGCGCGCATGTACTCAAACTCTGTATGGGGTTCTGCTAACGCGGCTGTTATTGAGGCAGAAGGTTCTACTAGACACTCCTACAAATTTTACGAGAATGGCACAGTTGACTTCCGACAGTCGGGTAGGGTTAACACCTTCCATATGAACACACCTATGGGCATATGGAATGATGCTACTGAGGCCCTAATGAACAACCTTACTACTAATGGCATGAATAGGGTAGCCATTGCTAGTGGTTCCGACGCACTAGTTAGTGGCTATTCTATCGGGGGGTATCGCCCTAATGGCTACCCAACCAAGGTCGGTTACCATATGTATTTACCAAGAAATAATGCTTTTGGTATAGCATGTGTAACAATTGGGGGGGATAACGGTAAATTCTGTCGATACTTCCTTGACATTGACGGTCAGATTTATGGGGGTACGGATTATGGTAATTTCAGCTACACCAAGAATGGTGCCTCTGATGCAAGAGTCAAACATGACATCTCCCCTGTTGGCGTTGAGAAGTCGTATTCCAACATTCAAGGTCTGGAGTTTGTAGAGTTTATATACAACAATGACGAGCAGGAGCGCGTCCGGCATGGCGTAATTGCGCAGCAAGCTGAGACTGTTGAACCTCTATACGTTAAGACTCGTAAGTATGTGGGCCTTAACCCCGGTGAGATTGTGGAGCAGAAGGAACTGGATACCACCCCAATGCTACTAGATACGATGCATGTAGTGCAATCGTTGATGCTGAAGATTGAAGCGATGGAAGCTGAGATTGCTGAGCTAAAGGCAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc941b2cb984546dd38ffc12515c083849c9cf22235f100f13d2376156ffd689
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative analysis of effectiveness for phage cocktail development against multiple Salmonella serovars and its biofilm control activity Ribeiro,J.M., Pereira,G.N., Durli,I., Teixeira,G.M., Bertozzi,M.M., Verri,W.A., Kobayashi,R.K.T. and Nakazato,G. — — GenBank