Protein

View in Explore
Genbank accession
APC42938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MIKYDIGKDEIVLHLKDNKYIMGYTIVGGYEENNGDVKVSRSILPDGFFVDFVSNKYAYYKNTNEVIYNKSFEDNSKSVEDIEYQPPEEFVPKEDYKKLESEVEELKRMLQELLSKKG
Physico‐chemical
properties
protein length:118 AA
molecular weight: 13852,43090 Da
isoelectric point:4,79757
aromaticity:0,12712
hydropathy:-0,76102

Domains

Domains [InterPro]
DC_0295
STR
3–118
DC_0295
IPR021358
STR
15–74
IPR021358 Coil
APC42938.1
1 118
Architecture
STR
STR 3-118
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage StAP1
[NCBI] 		1913667 No lineage information
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APC42938.1 [NCBI]
Genbank nucleotide accession
KX532239.1 [NCBI]
CDS location
range 61533 -> 61889
strand +
CDS
ATGATAAAGTATGACATTGGTAAAGATGAAATTGTGTTACACTTAAAAGATAATAAGTATATTATGGGATATACTATTGTAGGTGGATATGAAGAGAACAATGGTGATGTAAAAGTATCAAGGTCTATTCTACCTGATGGATTCTTTGTTGATTTTGTTAGTAATAAGTATGCGTATTATAAGAACACTAACGAAGTAATATATAATAAAAGCTTTGAAGATAACTCGAAGAGTGTAGAGGACATAGAATACCAACCACCAGAAGAGTTTGTACCTAAAGAAGACTACAAAAAATTAGAGAGTGAAGTAGAGGAACTAAAAAGAATGTTACAAGAATTGTTATCTAAGAAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3399385b5c8c845e670bc84b74e9bdacdff89f4bf4145c7d6f6fca3c1ab1e57f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7517
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Staphylococcus aureus phage SAP1 Senevirathne,A.N. and Kim,K.P. 2017-03-21 — GenBank