Protein

View in Explore

Genbank accession

UJJ22156.1 [GenBank]

Protein name

short tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,72

Protein sequence

MATNTIAHISDDSKYKTFDPTGTSFPANIKDVQAALAAIKPIAVDGIPDATATVKGIIRLATQQEVDDGINSNTAVTPATLAIRLAKPAATETVAGITRYATLAEAKTGAINNAAIVPTTLKGTLDEAFTVRTSTESRLGVIKISTQAAALAGTDDTTAMTPKKVLAAINAATAKIPTPQTSTETVSGISRLATAAETAAGTSRSGLAVSPFGLASMRSSPSAFGIVKGTTNAEVLAGTINNQYVSPASLLGRTGAVNRLGLVKLTTTAGSGDGNTALAYNADVVHLRGGQTINGALSISGNFRAARIDMSSGFINNQQIVTTNMLVDDVPVGCIMMWPTDSLPNNKWRFCHGGSLPKASYPTYHATVGTRFGGDANNAGVPDMRGLFVRGSGRSSHMTARDGKDSKGKEGLGYGCAGAGTGQVQTQQNRFHKHESGWGERNDRNWGRNGATVSVGHVGSAKTDWDNYKFFTNDGREVEAVNVRDSFATMNTEGLMGWENRPWNMSLNYIIKVA

Physico‐chemical properties

protein length:	514 AA
molecular weight:	53733,67240 Da
isoelectric point:	9,26883
aromaticity:	0,05837
hydropathy:	-0,21498

Domains

Domains [InterPro]

DC_0176
STR
1–439

DC_0176

SSF69349
STR
247–339

SSF69349 IPR044916

G3DSA:2.10.280.10
Unmapped
247–283

G3DSA:2.10.280.10 IPR037053 IPR027448

IPR015173
STR
249–314

IPR015173 SSF88874

IPR011083
ATT
333–389

IPR011083

UJJ22156.1

1 514

Architecture

STR

ATT

STR

STR 1-318 | ATT 319-389 | STR 390-513 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0176	STR	DC_0176	1	439	Novel HMM	DC_0176	Central	Low	Positional only	613 proteins / 613 hits
SSF69349	STR	SSF69349	247	339	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
G3DSA:2.10.280.10	Unmapped	-	247	283	Gene3D	None	-	-	-	-
IPR015173	STR	DC_0719	249	314	InterPro cluster	Bacteriophage T4, Gp12	Central	Low	Positional only	349 proteins / 349 hits
IPR037053	ATT	IPR037053	319	385	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	324	513	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	333	389	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	386	506	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	422	513	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

UJJ22156.1

1 514

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	291	291	0,8445
Central domain	292	490	200	0,0136
C-terminal	491	514	23	0,9960

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-291

Central
292-490

C-terminal
491-514

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Erwinia phage Virsaitis27 [NCBI]	2910775	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Erwinia rhapontici [NCBI]	55212	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

UJJ22156.1 [NCBI]

Genbank nucleotide accession

OL770309.1 [NCBI]

CDS location

range 93013 -> 94557
strand +

CDS

ATGGCAACAAATACTATTGCTCACATTAGTGACGATTCAAAATATAAAACGTTTGACCCAACAGGAACAAGTTTTCCTGCTAATATCAAAGACGTTCAGGCCGCATTAGCGGCCATTAAACCTATTGCCGTTGACGGTATCCCAGATGCGACAGCAACAGTTAAAGGCATTATCAGATTAGCAACACAACAAGAAGTTGATGATGGAATTAATAGCAATACAGCAGTAACTCCTGCTACTTTAGCTATTCGTTTAGCTAAACCTGCTGCTACTGAAACTGTTGCTGGGATTACTCGATATGCTACTTTAGCCGAAGCTAAAACAGGTGCAATTAATAATGCTGCTATTGTTCCAACTACTTTAAAAGGAACTTTAGATGAAGCTTTTACTGTAAGAACTTCTACAGAAAGTAGATTAGGTGTTATTAAAATTTCTACTCAAGCAGCAGCTTTAGCCGGAACAGATGATACCACGGCTATGACCCCTAAAAAGGTTTTAGCCGCTATTAACGCAGCAACTGCTAAAATACCTACTCCTCAAACTTCTACCGAAACTGTTTCAGGTATCTCAAGACTTGCTACGGCAGCTGAAACTGCTGCAGGAACTTCTCGTTCTGGGTTAGCTGTTTCGCCATTTGGCTTAGCTTCTATGCGTTCAAGCCCTTCAGCATTCGGTATCGTTAAAGGCACTACAAATGCCGAAGTATTAGCTGGGACTATTAATAACCAGTATGTTTCTCCTGCTTCTTTGTTAGGTCGCACCGGTGCTGTTAACCGTCTTGGTCTTGTTAAATTAACTACTACAGCTGGTTCTGGTGACGGAAATACTGCTTTAGCGTATAATGCTGATGTTGTCCATCTTCGTGGTGGACAGACAATTAATGGAGCTTTATCTATTTCTGGTAATTTTAGAGCGGCCCGAATTGATATGTCTTCAGGTTTTATCAATAACCAGCAAATAGTAACAACTAACATGCTAGTTGATGATGTTCCTGTCGGGTGCATTATGATGTGGCCTACAGATTCACTCCCTAACAATAAATGGCGCTTCTGTCATGGTGGTTCATTACCAAAGGCCTCATATCCGACTTACCATGCTACCGTAGGTACTCGTTTTGGTGGAGATGCCAATAATGCAGGTGTTCCTGATATGCGCGGGCTATTTGTTAGAGGTTCAGGTCGTTCTAGTCATATGACTGCTAGAGACGGTAAGGATTCTAAAGGTAAAGAAGGCCTTGGGTATGGTTGTGCTGGTGCAGGAACTGGACAAGTACAAACTCAACAAAATAGATTCCATAAACACGAATCTGGGTGGGGTGAAAGAAATGATCGCAACTGGGGAAGAAACGGAGCAACCGTAAGTGTAGGACATGTTGGTTCTGCTAAAACAGATTGGGACAACTATAAGTTCTTTACAAATGATGGACGCGAAGTAGAAGCTGTTAACGTACGAGATTCTTTCGCAACAATGAATACTGAAGGACTTATGGGTTGGGAAAACCGTCCTTGGAATATGTCATTAAACTATATTATTAAAGTAGCATAA

Genome Context

Tertiary structure

PDB ID

1f7e85a6a18053ba80776009a65e26fe596f750155c4cb185f19e1418415a531

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6903

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genome sequence of Erwinia phage Virsaitis27	Dislers,A., Zrelovs,N. and Kazaks,A.	2020-06-19	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature