Protein

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Genbank accession

AJD82920.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence RBPdetect

Probability 0,78

Evidence RBPdetect2

Probability 0,95

Protein sequence

MHIAPLRGAGGGGGGSSSKYKRTDDNLFSRDTVELVLGLSVGPIRGLTRGMKSFYVGGTPLMSEGGDMNFQSFNLGVKLGYESDGPVSYKLGGESSNKSVGTKMMSGTWISRQTEQTVRGVIDQLQVRINFQQLYRTDDKGDYNHTAQFYIQYKPASSGWWQNYGGEMVQITGKTTSGYYVDFVFDVPRINDDWLIRVMKVNPDSTNTNVCDMAWDSFQAITKSNRRYNKLALAHIVALATSQFGSIPDFAGVYDGRLIQIPTNYNPDTRLYDEITPWNGTFKTGWTNCPPWILYDLIMNPDYGLRKYYPQITVNRFDFYDAAKWCDTFVPNGKGGYQPRYTFNMALLEAKDGLEMLQWIAGSFGAVIFDDATGQVYLKVDKWEEPKMLFTPENVEGGDFNYSFTDMTTRYNDYKVQFVNPDLDWNQDQRRVYDPTHIASHGNIPTEMVMVGCTDEHEALRRGYYRMITALTETCSVTFNVARLGKVIDPYMVIAIADPTPGWSVSGRIKAYMNSYVQLRDPIYFTTVQNYTMTLQTVDGLVKVVVNPERVGTAFQVKVVSGFVPDGLPDRTVFSIEDNGNFGVAKPFRVMDIENIEGSADRFTIMAIEINRNKQAGADNCTPVGSVQYSFKNPLIPPPPMNIQADSGTEQMIIAQDGSIMARIFAYWDAPPNVLIERYEIEWKESDQSTWYYTTSPSESVFLAPCKSGVAYDIVVWAVNSFGNRSSALTLFNYVCIGKTAPPSNVKNFTIRRRTNDILLQWDAIPDLDRKGYEIRIGTTWETATVLVTDYSATQFAWTTTEGGSYSFLISAIDSSGNYSLLPTLQTIYIQGPSAVTGVIAIQSNNRIELRWTPNPEDNILEYEIREGGAWGTAVFLAKVKSTGYSVTAGSAGTRMFWIKAIASPGVYSERASFVTTDVAQLDDTNIIYTTDEVANGFLGSRYNMVVVGGELRMDSGRQRSEYIFPVTLPTRFRAQNTLFVGLDAIVDYSTTWAQATYPWDDPKARTPWVTPGDISSIGYKSEISLRREIPADVLHSWPLNGTLVSEGLSDRNPANILEQENITYGTGKYGRGLYVESGTPTPTKLRYTTIIPSTFSFSAWVRPMDVEDDVWFVMERGADWIAVVYNKEREAVMVTSTDSKQILIPFKINPGERYLVTLVQGSGDRTLYVGREDNTYAKGMVSAFPIGAITSVRYY

Physico‐chemical properties

protein length:	1196 AA
molecular weight:	133933,37620 Da
isoelectric point:	5,13378
aromaticity:	0,12124
hydropathy:	-0,28445

Domains

Domains [InterPro]

IPR053171
Unmapped
11–821

IPR053171 IPR013783 IPR013320

DC_0129
STR
16–829

DC_0129 DC_1836

IPR055385
ATT
96–223

IPR055385 IPR032876 IPR036116 IPR036116

IPR013783
STR
634–732

IPR013783 IPR013783

IPR003961
STR
637–723

IPR003961 DC_0960

IPR003961
STR
639–743

IPR003961

AJD82920.1

1 1196

Architecture

STR

ATT

STR

ATT

STR

RBD

STR

STR 16-95 | ATT 96-223 | STR 224-352 | ATT 353-508 | STR 509-930 | RBD 931-1020 | STR 1021-1171 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	11	821	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	16	829	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	96	223	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	353	508	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR036116	STR	IPR036116	632	724	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	634	732	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	637	723	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	639	743	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	739	820	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	742	828	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_0960	STR	DC_0960	792	928	Novel HMM	DC_0960	Central	Low	Positional only	21 proteins / 21 hits
IPR013783	STR	IPR013783	833	930	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_1836	RBD	DC_1836	891	1033	Novel HMM	DC_1836	C-terminal	Low	Positional only	21 proteins / 21 hits
IPR013320	STR	IPR013320	1021	1171	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

AJD82920.1

1 1196

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	927	927	0,9205
Central domain	928	1148	222	0,7773
C-terminal	1149	1196	47	0,0442

Note: Constraints were applied during segmentation.
Fixed 45 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-927

Central
928-1148

C-terminal
1149-1196

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Achromobacter phage JWF [NCBI]	1589748	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Achromobacter xylosoxidans [NCBI]	85698	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Genbank protein accession

AJD82920.1 [NCBI]

Genbank nucleotide accession

KP202971 [NCBI]

CDS location

range 25378 -> 28968
strand +

CDS

ATGCACATTGCACCTTTGCGTGGAGCCGGTGGCGGCGGGGGCGGCAGCAGCTCCAAGTACAAGCGCACCGATGACAACCTCTTCTCCCGAGACACCGTTGAACTGGTCCTCGGGTTGAGCGTTGGTCCCATTCGTGGCCTGACCCGTGGCATGAAGAGCTTCTACGTTGGCGGCACCCCGCTGATGTCGGAAGGCGGCGACATGAACTTTCAATCTTTCAACCTGGGCGTCAAGCTCGGGTACGAGAGCGATGGTCCGGTCTCCTACAAGCTGGGTGGCGAATCCTCCAACAAGTCCGTTGGCACGAAGATGATGAGCGGTACGTGGATCAGTCGGCAGACCGAGCAGACCGTGCGCGGCGTGATCGACCAGCTCCAGGTTCGCATCAACTTCCAACAGCTGTACCGCACCGACGACAAGGGTGACTACAACCACACCGCGCAGTTCTACATCCAGTACAAGCCGGCGTCTTCCGGCTGGTGGCAGAACTATGGCGGCGAGATGGTCCAGATCACGGGCAAGACCACCTCTGGCTACTACGTGGACTTCGTCTTCGACGTGCCGCGCATCAATGATGACTGGCTCATCCGAGTCATGAAGGTGAACCCGGACAGCACGAACACCAACGTGTGCGACATGGCCTGGGACAGCTTTCAAGCTATCACCAAGAGCAATCGTCGCTACAACAAGCTGGCACTGGCCCACATCGTCGCGCTGGCCACCAGCCAGTTCGGCTCCATCCCCGACTTTGCTGGCGTCTACGATGGTCGCCTCATCCAGATCCCGACGAACTACAACCCTGACACCAGGCTCTACGACGAGATCACGCCGTGGAACGGCACGTTCAAAACGGGTTGGACGAACTGCCCGCCGTGGATCTTGTATGACCTGATCATGAATCCCGACTACGGCCTGCGGAAGTATTACCCGCAGATCACGGTCAACCGCTTCGACTTTTACGACGCGGCCAAGTGGTGCGATACCTTCGTGCCGAACGGCAAGGGTGGCTATCAGCCGCGCTACACGTTCAACATGGCGCTGCTGGAGGCCAAGGATGGTCTGGAGATGCTGCAATGGATCGCGGGCAGCTTCGGTGCTGTGATCTTCGATGATGCAACCGGCCAGGTCTATCTGAAAGTGGACAAGTGGGAAGAGCCGAAGATGCTCTTCACGCCGGAGAACGTTGAAGGTGGAGACTTCAACTACAGCTTCACCGACATGACCACGCGGTACAACGACTACAAGGTGCAGTTCGTCAACCCGGATCTCGACTGGAACCAGGATCAACGTCGCGTCTACGATCCCACCCACATCGCTTCGCATGGCAACATCCCGACCGAGATGGTCATGGTGGGATGCACCGACGAGCATGAAGCGCTGCGCCGTGGTTACTACCGCATGATCACGGCCTTGACCGAAACGTGCTCGGTCACGTTCAACGTTGCTCGCCTGGGCAAGGTGATCGACCCGTACATGGTCATCGCTATCGCTGACCCGACCCCTGGCTGGTCCGTCAGCGGCCGGATCAAGGCGTACATGAACAGCTACGTCCAGCTGCGAGATCCGATCTACTTCACGACGGTGCAGAACTACACCATGACCTTGCAGACCGTAGATGGCCTGGTCAAGGTGGTGGTAAATCCTGAGCGCGTGGGGACGGCTTTCCAGGTCAAGGTGGTGTCGGGCTTTGTGCCGGATGGTCTGCCGGATCGCACGGTGTTCTCTATCGAGGACAACGGCAACTTCGGCGTGGCCAAGCCCTTCCGGGTAATGGACATCGAGAACATCGAAGGCAGCGCTGATCGCTTCACGATCATGGCCATCGAGATCAACCGGAACAAGCAGGCCGGCGCGGACAACTGCACGCCGGTTGGCAGCGTCCAATACTCGTTCAAGAACCCGCTTATCCCTCCACCCCCGATGAACATTCAGGCGGACTCCGGCACCGAGCAAATGATCATCGCCCAGGATGGTTCCATCATGGCGCGGATCTTCGCGTATTGGGACGCCCCGCCCAACGTGCTAATCGAGCGCTATGAGATCGAGTGGAAAGAGAGCGATCAATCCACCTGGTATTACACGACCAGTCCCAGCGAAAGCGTGTTCCTTGCACCTTGCAAGAGCGGCGTGGCTTACGACATCGTGGTCTGGGCTGTGAACTCGTTCGGCAATCGCTCGTCGGCGCTGACGCTGTTCAACTATGTCTGCATCGGCAAGACCGCGCCCCCGTCGAACGTCAAGAACTTCACGATCCGCCGCCGCACGAATGACATCCTGCTGCAATGGGACGCTATCCCCGACCTCGACCGCAAGGGCTACGAGATCCGCATTGGCACGACGTGGGAGACCGCGACCGTGCTGGTGACGGACTACTCCGCTACGCAGTTCGCATGGACGACGACTGAAGGCGGAAGCTACTCGTTCTTGATCAGTGCCATCGACTCGTCGGGTAACTACTCGCTGCTGCCCACGCTGCAAACGATCTACATTCAAGGGCCGAGCGCGGTCACAGGTGTCATCGCCATCCAGTCGAACAACCGCATCGAGCTGCGCTGGACGCCGAACCCTGAAGACAACATCTTGGAATACGAGATCCGGGAGGGTGGCGCGTGGGGTACTGCGGTGTTCCTGGCCAAGGTCAAGTCCACCGGCTACAGCGTCACGGCCGGTTCCGCTGGCACGCGGATGTTCTGGATCAAGGCCATTGCCTCGCCTGGCGTCTACTCCGAACGTGCATCGTTCGTGACGACCGACGTAGCCCAGCTGGACGACACCAACATCATCTACACGACGGACGAAGTGGCCAATGGCTTCCTCGGTTCGCGCTACAACATGGTGGTGGTCGGCGGCGAGCTGCGAATGGACAGCGGCCGGCAGCGTTCCGAGTACATCTTCCCGGTCACGCTACCCACGCGCTTCCGGGCGCAGAACACGCTGTTCGTGGGTCTTGACGCCATCGTGGACTACAGCACGACTTGGGCGCAGGCCACCTACCCGTGGGACGACCCCAAGGCGCGCACGCCGTGGGTCACGCCCGGCGACATCTCATCCATCGGCTACAAGTCCGAGATCTCGCTGCGCCGCGAGATCCCTGCGGATGTGCTGCACTCCTGGCCCCTGAACGGCACGCTGGTCTCGGAAGGCTTGTCCGACCGCAACCCCGCCAACATCCTGGAACAGGAGAACATCACCTACGGCACCGGCAAATACGGCCGAGGCCTGTACGTGGAAAGCGGCACGCCGACGCCAACCAAGCTGCGCTACACGACCATCATCCCGTCCACCTTCAGCTTCAGCGCCTGGGTTCGCCCGATGGATGTTGAGGACGACGTGTGGTTCGTGATGGAACGCGGAGCTGACTGGATCGCCGTGGTCTACAACAAGGAACGCGAAGCCGTCATGGTCACTTCGACCGACAGCAAGCAGATCCTCATTCCTTTCAAGATCAACCCTGGTGAACGTTACCTGGTCACGCTCGTTCAAGGTAGCGGTGATCGCACCTTGTACGTCGGCCGTGAAGACAACACCTATGCCAAGGGCATGGTCTCCGCCTTCCCGATTGGCGCTATCACCAGCGTGAGGTACTACTGA

Genome Context

Tertiary structure

PDB ID

5f7d85adb09b461d50a42edb91cbf4145664b782709a4cd1679492d3448c3fa1

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,2690

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Characterization and genome comparisons of three Achromobacter phages of the Siphoviridae family	Dreiseikelmann,B., Bunk,B., Rohde,M. and Wittmann,J.	2017-03-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature