Protein

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Genbank accession
UYE93525.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSFLGPNQYEFDMSGEHPDNLVIEEPLEIDPDSGTKIVVPNYGPCYAKGFKLTLPNGQLLTKEVDYQFYSLMGELTEYTGKGVVGIIEILRPNTNKVLATYQTLGDTSFWDSSLIKMIINAATDNRPVYWENLHDKPLGFPSAVHGESFIYQLTSFTEFVNFINDFTQSITDQPHLVDVKVDHLAALIDSTINRYKLMLQDLVNAHSGAYNAHGLTKASIGLGNVDNFKTATINQARIGESNRLHLTPPGLKEIINEFGYDQSRLLENNSLPISMYGNRNFIPPSIDGSYEAVGVTTNRAGFCIEEDGSLAVLAPRFDGKTAGLYFSQVVNFTDPATIKYNYTAVRYDHVRLKNDGVIAKSIMGGSDFNAMIIGDDTSNNMYVTLTKGTFNPAKHELKKIDVSNAGLPRTTGVLTYANMAYLGDRIAVMMHLSRTVGSNTESFGTIKMFYIDINDIENLSMQTVPLRDWIINYTMPDGKVVTGSQYLDLSPMSVDPDNPGKLKQLYYTFPESLSASGGGYRSVNVISTINPDDDTESIINVNRSFYFTYRDSNNVLRSHGGTSNEVIWKRVDDTFSLLDCTPITDMNLGNLGFTLQPTANERTSVFANQCSSMLSNGWRATCRSGNEDHGWNNAMFTERSNKTPWEWLSKCSYTANHTINRIGSKETFNPPMKRGIKPLELTWTRDGYEVTHLKSQNGAATKTKVKLHDTNATANLPFFNWEVRPEVNLKENLMSLPIPTTDQETEIADSFVRPNSNITGDAAFLSSVSAGYGLNIKGNWGQNRSVGGLYAFDPALIAGTDDGVLLYDSAGDLLYYPSTIVNQLKGLVEGAGVHPVKGVSICDLTANVNKNSGYSGSWNPNLSIVVVTYGKYVPSAPSKFGRMFVIRPVISNNTGNLYNPNYPRIVTGYTILDSTPERQFSSTEAQMTETTWSLSTLGPSGSQRRMFQGYVSGNMMDFAFETMMYSAVTGNGLTNSFLGRIDLSTGLLESYNHYALGPAWNTNAKLAVPRVGLMTTSNSPVDYGGCALLASFNSVTYCLYNTYLKDGWFVYIAECDVVFNGIKVHIPATVIDVRTVDPNYLNQRFYIYVYWDGRRPAYFYLSKLKFAESVWQMWVGTVDTDASGIKTITRQNVLSLNGIRIGTERGGGTIMGSLGSVNSFGSIPWFSRDDIV
Physico‐chemical
properties
protein length:1172 AA
molecular weight: 129690,51940 Da
isoelectric point:5,51608
aromaticity:0,10751
hydropathy:-0,24608

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE93525.1
1 1172
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,9928
Central domain 269 483 216 0,8441
C-terminal 484 1172 688 0,3989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-483
C-terminal
484-1172

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage FishSpeaker
[NCBI] 		2985553 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella oneidensis MR-1
[NCBI] 		211586 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Shewanellaceae > Shewanella > Shewanella oneidensis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE93525.1 [NCBI]
Genbank nucleotide accession
OP589283 [NCBI]
CDS location
range 122674 -> 126192
strand +
CDS
ATGAGTTTTTTAGGACCTAATCAGTATGAGTTTGATATGTCAGGAGAACACCCTGACAATCTTGTCATCGAAGAACCATTAGAAATCGATCCTGATTCAGGCACTAAAATAGTGGTGCCTAATTACGGTCCGTGTTACGCTAAAGGATTTAAGTTAACTCTCCCCAACGGGCAGTTACTCACTAAAGAAGTGGATTATCAGTTTTATTCCCTAATGGGTGAGTTAACGGAATACACTGGTAAAGGTGTTGTAGGGATTATTGAAATCCTGCGTCCTAACACCAATAAAGTATTAGCGACGTATCAGACATTAGGTGATACCTCATTTTGGGACAGCAGCCTAATCAAAATGATTATTAATGCTGCAACTGATAATCGCCCAGTCTATTGGGAAAATCTCCATGACAAGCCATTAGGTTTCCCTTCTGCGGTGCATGGCGAAAGTTTCATTTATCAGTTAACTTCGTTTACCGAATTTGTTAATTTCATTAATGATTTCACACAATCTATTACCGACCAACCTCATTTAGTAGACGTTAAAGTTGACCACTTAGCAGCATTGATTGATAGCACCATTAATCGTTATAAGTTAATGCTTCAAGATTTAGTTAATGCTCATAGCGGTGCTTACAACGCCCACGGATTAACTAAAGCGAGTATTGGGTTAGGCAATGTTGACAACTTTAAAACAGCAACAATTAATCAAGCAAGAATAGGGGAAAGCAATCGTCTTCATTTAACTCCTCCCGGTTTAAAGGAAATCATTAATGAGTTTGGCTATGACCAAAGCCGGTTATTAGAAAACAACTCACTCCCTATCAGCATGTACGGTAATCGTAACTTTATCCCCCCATCTATTGACGGAAGTTATGAAGCGGTCGGGGTGACCACCAACCGTGCCGGATTCTGTATTGAGGAAGATGGTAGTTTGGCTGTATTGGCGCCCCGTTTTGATGGTAAAACAGCAGGATTGTATTTTAGCCAAGTGGTTAACTTTACTGACCCGGCAACTATTAAATACAATTATACTGCTGTACGATATGACCATGTGCGTTTAAAAAACGATGGTGTAATTGCAAAGTCAATAATGGGCGGTAGTGATTTTAATGCCATGATTATTGGTGATGATACATCAAACAACATGTACGTCACTCTTACCAAAGGTACGTTTAATCCAGCAAAACATGAATTGAAAAAAATTGATGTTTCAAATGCGGGATTACCAAGAACGACTGGTGTATTAACTTATGCAAACATGGCTTACTTGGGTGACCGAATTGCAGTGATGATGCATCTCTCCAGAACTGTGGGGAGTAATACAGAGTCGTTCGGTACAATTAAGATGTTCTATATCGACATAAACGATATTGAAAATCTTTCCATGCAAACTGTTCCATTACGGGATTGGATAATTAATTACACAATGCCTGATGGCAAAGTGGTTACAGGAAGTCAATACCTTGATTTATCACCAATGAGTGTTGACCCCGATAACCCCGGAAAATTAAAACAGCTTTATTACACATTTCCTGAGTCCTTATCTGCTAGTGGTGGTGGTTATCGTTCTGTCAACGTAATTTCAACAATTAATCCAGATGATGACACAGAGTCTATTATTAACGTGAATCGTTCTTTTTATTTTACGTATCGCGATTCTAATAATGTGCTGCGTTCTCATGGAGGGACATCAAACGAAGTTATCTGGAAACGTGTGGATGACACATTCTCTCTGTTAGACTGTACCCCTATTACCGACATGAATTTAGGTAATTTGGGATTTACGTTACAACCCACAGCAAACGAAAGAACATCAGTTTTCGCCAACCAATGTAGTAGTATGCTTTCAAATGGTTGGCGGGCAACGTGTCGTTCCGGTAATGAAGACCACGGATGGAATAATGCGATGTTTACAGAGCGCTCCAACAAAACACCATGGGAGTGGTTGTCAAAATGTTCCTACACTGCTAACCACACCATCAATCGCATCGGTAGTAAAGAGACGTTTAATCCTCCAATGAAACGTGGTATTAAACCGCTTGAATTAACATGGACAAGAGATGGTTATGAAGTTACCCATCTTAAATCCCAGAATGGTGCCGCCACTAAGACAAAGGTAAAACTACACGACACTAATGCAACTGCTAATTTACCTTTCTTCAATTGGGAAGTAAGACCTGAGGTTAACTTAAAAGAAAACTTAATGTCTCTTCCTATCCCCACAACCGATCAAGAAACCGAAATTGCGGATTCCTTTGTTAGACCTAATTCTAACATTACTGGTGACGCAGCTTTTCTTTCTTCTGTTAGTGCGGGTTATGGTTTAAACATAAAGGGGAATTGGGGGCAAAACAGAAGTGTCGGAGGATTATACGCATTTGACCCAGCATTAATAGCGGGAACTGACGATGGTGTGTTGCTTTATGATAGTGCGGGTGATTTATTGTATTATCCATCTACCATTGTAAACCAACTGAAGGGATTGGTAGAAGGTGCAGGCGTGCACCCTGTTAAAGGTGTAAGCATTTGTGACTTAACTGCCAACGTTAACAAAAACTCTGGTTACTCAGGAAGCTGGAATCCAAATCTCAGTATTGTTGTAGTGACTTATGGTAAGTACGTTCCTTCCGCACCCTCTAAGTTTGGACGAATGTTTGTTATACGACCAGTAATTTCTAACAACACTGGAAACTTGTATAATCCTAACTATCCTCGAATTGTAACTGGTTACACAATCTTGGATTCTACACCAGAACGTCAATTTAGTTCTACTGAAGCGCAAATGACGGAAACTACTTGGTCTCTTTCTACTTTAGGGCCTAGTGGTTCACAACGTCGCATGTTCCAAGGTTATGTTTCAGGCAATATGATGGATTTTGCATTTGAAACCATGATGTATTCTGCCGTAACTGGTAATGGATTAACCAATTCTTTTTTAGGAAGAATCGACCTATCAACAGGGTTGCTGGAAAGTTACAATCACTATGCGTTAGGACCCGCTTGGAACACAAATGCAAAACTCGCGGTACCTCGTGTGGGGTTGATGACTACTTCTAATTCCCCGGTGGATTACGGAGGTTGCGCTCTACTTGCCAGTTTTAACAGCGTCACTTACTGTTTGTACAACACCTATCTGAAAGATGGCTGGTTTGTCTATATTGCAGAATGTGACGTTGTGTTTAACGGGATTAAGGTTCATATCCCTGCTACGGTTATCGATGTTCGAACAGTTGACCCAAATTATCTCAACCAACGTTTTTATATTTACGTTTATTGGGATGGCAGAAGACCTGCTTATTTTTACTTAAGTAAGTTAAAATTTGCAGAGTCGGTTTGGCAAATGTGGGTTGGGACTGTTGATACAGATGCTTCAGGTATCAAGACTATTACTCGTCAAAACGTATTATCGTTAAACGGGATAAGAATCGGTACTGAAAGAGGGGGTGGTACGATTATGGGGAGTTTGGGTTCTGTCAATTCATTTGGTAGTATCCCTTGGTTCTCGAGAGATGATATTGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
67f5307ded6bfdf4cd650094574a20416b2b0ae5126e3875f2d36458b8a6a3cf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The outer-membrane cytochrome OmcA is essential for infection of Shewanella oneidensis by a zebrafish-associated bacteriophage Grenfell,A.W., Intile,P., McFarlane,J., Leung,D., Abdalla,K., Wold,M., Kees,E. and Gralnick,J. — — GenBank