Protein

View in Explore
Genbank accession
YP_009949108.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNILRSFTETVVTTPTDLFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKVEPAITEGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAANAAEVAASQTQYYLKYFNPEIVYPKNARIMLDNGDIVRSTVANNTSNPNVDMTGWVKVNSVSQIFDETYNITQSVINGNLITVDNFGAKGDGVTDDSAAFQAYCDSALTGQNLYLGAKGRYIIKNQVDLKGKGLVGNGCGKVSEFYYNLGCIDVDGSSPDLQGKTVFINCGPTIQNLTARCSNGAGKQVSFIEIDGYLANIDHITLINFYNQIVVKQALVGFNFTNAWLYYSQNAGIYCEDPLNRVSTTGTFHNIYFQLGDGYAMIFDRDIHGCDFDNIIFESMNGGIKARTVAHCGFGKFWCENLKTATSKDWLEVTGANSCYGNSFTGYVKLLGGWTSKTSPILDSLSTNNYGGVSVSADGISIVAAGNKAKMLMLPSGFKTGNAVIDETHINSTTVTPLTKRRVIGADASGAQYLASDTYTKLSRKWSTYNHGSNNAGAFYAPMMLTYDQSFSTPQNNNGWKIVKESVGVYRVERVSGNTALITNGHIVVGSPLMGSRRGTGTGATHGIQMIETYAGSWTSYTEAAGFKVFWRDSSNALVDPHRFTVAFTATS
Physico‐chemical
properties
protein length:699 AA
molecular weight: 76295,51690 Da
isoelectric point:5,27201
aromaticity:0,10587
hydropathy:-0,17368

Domains

Domains [InterPro]
DC_0704
ATT
40–275
DC_0704 DC_0160
Coil
Unmapped
122–149
Coil IPR012334
IPR011050
STR
221–454
IPR011050
IPR024535
ENZ
225–402
IPR024535
YP_009949108.1
1 699
Architecture
ATT
STR
ATT 40-275 | STR 276-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009949108.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9948
Central domain 241 524 285 0,9918
C-terminal 525 699 174 0,9898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-524
C-terminal
525-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SWH-Ab-3
[NCBI] 		2059857 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009949108.1 [NCBI]
Genbank nucleotide accession
NC_047883.1 [NCBI]
CDS location
range 39523 -> 41622
strand +
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGACCTTTTCCCTATCAGTTTTGAATATGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAAGACTTGGGGTATACTGTATCTCAAGTTAACGCTGTTACTCTAAAAGTTGAACCTGCTATTACAGAAGGTACGGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTATTCATTGACCAGAATGTTGATGCAGATTTTAGACAGATCGTGCACTCTCAGCAAGAGGTGCGGGATGGCTTTATTAAACTACGTGGTGATGTACTACCATTAGTGCATGGTTTACAAGAAGCTTTGCAACAAGCACAGGAGGCTAGCGAAGCTGCTCAAGAGGCTGCTAATGCAGCAGAAGTAGCTGCTTCACAAACACAGTACTACTTAAAGTACTTCAACCCTGAAATAGTGTACCCTAAAAATGCGCGCATTATGCTTGATAATGGCGATATTGTTCGCTCTACCGTTGCGAATAATACATCCAATCCGAATGTTGATATGACTGGATGGGTAAAGGTTAATTCTGTTAGTCAGATTTTTGATGAAACTTACAATATCACCCAATCAGTAATTAATGGAAATCTAATTACTGTTGATAATTTTGGCGCAAAGGGTGATGGGGTTACAGATGATAGCGCAGCTTTTCAAGCATATTGTGATAGTGCTTTAACTGGACAAAATCTATATCTTGGGGCAAAAGGTCGCTACATCATCAAGAATCAAGTAGACCTAAAAGGTAAAGGTTTGGTTGGCAACGGGTGCGGAAAGGTTAGTGAGTTCTACTACAACTTAGGTTGTATTGATGTTGATGGCTCAAGCCCTGATCTTCAAGGTAAAACAGTATTCATTAATTGTGGTCCTACAATCCAAAATCTTACTGCAAGATGCTCTAATGGGGCAGGAAAACAGGTCTCATTTATTGAAATAGACGGCTATCTAGCCAATATTGACCACATAACGCTTATTAATTTCTACAATCAGATTGTTGTTAAACAAGCACTTGTTGGTTTTAACTTCACAAACGCTTGGTTATATTACTCACAAAATGCTGGAATTTATTGTGAAGACCCATTGAACCGAGTCAGCACAACTGGAACATTTCACAACATTTATTTCCAATTAGGTGACGGTTATGCAATGATTTTCGACAGGGATATCCATGGGTGTGATTTCGATAATATTATATTCGAATCTATGAATGGAGGTATCAAGGCTCGAACAGTAGCACATTGCGGGTTTGGTAAATTCTGGTGTGAGAACTTAAAGACAGCTACATCTAAAGATTGGCTAGAAGTCACTGGTGCTAATAGCTGTTATGGGAATAGCTTTACTGGCTATGTTAAATTATTAGGCGGCTGGACATCAAAAACATCACCAATACTAGATTCTTTGTCAACAAATAACTACGGTGGCGTGTCGGTTAGTGCGGACGGTATATCAATCGTTGCAGCAGGCAACAAAGCTAAGATGCTAATGCTACCTAGCGGCTTTAAAACAGGTAATGCTGTCATTGACGAAACACATATTAACTCTACTACTGTAACACCATTAACTAAACGCCGTGTTATCGGCGCAGATGCTTCTGGCGCTCAGTATCTTGCATCGGATACGTACACTAAATTATCTCGTAAATGGAGTACGTATAATCATGGTTCTAACAACGCGGGTGCATTCTATGCACCAATGATGCTGACTTATGATCAGTCATTCAGCACACCTCAAAATAACAACGGTTGGAAGATCGTAAAAGAGTCAGTCGGGGTATATCGAGTTGAGCGAGTTTCTGGAAATACAGCGTTAATCACAAATGGGCACATTGTTGTTGGCTCACCACTAATGGGTTCTCGTCGGGGTACTGGAACAGGTGCTACGCATGGAATTCAAATGATTGAGACCTATGCAGGTTCGTGGACTTCTTACACAGAAGCGGCTGGTTTTAAAGTGTTTTGGCGCGATTCTAGCAATGCCCTAGTCGATCCTCATAGATTTACAGTTGCATTTACAGCAACGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
14888462ba798472d3db437dfee6ab3ab16ffa705c17adf7c829029dd55e7bb7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6830
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing and bioinformatic analysis of genome of Acinetobacter baumannii bacteriophage SWH-Ab-3 Juan,L. and Bo,Z. 2025 — GenBank