Protein

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Genbank accession

BBC78246.1 [GenBank]

Protein name

Phage tail fibers

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MAIPSVTITPVNASPQLGQTLTINSVVEFDPTDVYTSYKWELSGADTGVTTATYTKANITSADAGSYVLKVMHGVDAGSATETASSPAVITTLPATTVSIVSTTTDIYVGDTLTITATPTGVPSGATVGAYEWSKGGTVVSGQTTSTLTKTVAAGDAGSYTAKVSYTVTGQAPIKTAASNAISVTVGPALAFATNLNATASVSTGQALTLTVAASGGKSPYTYQWKKGSANIGTNLNTFIVPSADSTTAGTYTVEVTDAASHKITSASCVVTVVPALSLSTDLSATKSVVSGKTLTLTIVAANGKTPYTYQWKRAGVEIPSETAATFTKSASPADAGTYTCEVTDDNNDKITSNTCVVTVSLLPDLEVLWTVHPIPWRDTSFTPLGYWVLDEILLQKADGKDWKTDYATYHYTEEVQTILEAFNAMGEVEIQDSRNGYIHKMSLI

Physico‐chemical properties

protein length:	445 AA
molecular weight:	46303,15040 Da
isoelectric point:	4,77910
aromaticity:	0,07416
hydropathy:	0,04000

Domains

Domains [InterPro]

IPR013783
STR
3–86

IPR013783 IPR013783 IPR007110 DC_0400 DC_0894

IPR007110
STR
4–85

IPR007110 IPR036179 DC_0444 IPR013783

IPR003599
STR
10–85

IPR003599 IPR003599 IPR013783 IPR007110

DC_1007
ATT
78–193

DC_1007 IPR003599 IPR003599

PTHR45889
Unmapped
152–344

PTHR45889

IPR036179
RBD
199–273

IPR036179 IPR036179

IPR025667
Unmapped
209–229

IPR025667 PF13895

cd00096
STR
302–355

cd00096

BBC78246.1

1 445

Architecture

STR

ATT

STR

RBD

STR 3-77 | ATT 78-193 | STR 194-361 | RBD 362-445

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	3	86	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR007110	STR	DC_0008	4	85	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR003599	STR	DC_0008	10	85	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
DC_1007	ATT	DC_1007	78	193	Novel HMM	DC_1007	N-terminal	Low	Positional only	32 proteins / 32 hits
IPR013783	STR	IPR013783	93	186	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR036179	RBD	IPR036179	99	169	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR003599	STR	DC_0008	102	187	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
PTHR45889	Unmapped	-	152	344	PANTHER	IG-LIKE DOMAIN-CONTAINING PROTEIN	-	-	-	-
DC_0444	STR	DC_0444	170	276	Novel HMM	DC_0444	Central	Low	Positional only	26 proteins / 26 hits
IPR007110	STR	DC_0008	188	265	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	194	272	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003599	STR	DC_0008	197	274	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR036179	RBD	IPR036179	199	273	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR025667	Unmapped	-	209	229	InterPro	SprB repeat	-	-	-	-
DC_0400	STR	DC_0400	271	360	Novel HMM	DC_0400	Central	Low	Positional only	137 proteins / 137 hits
IPR007110	STR	DC_0008	275	352	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	281	360	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003599	STR	DC_0008	284	361	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR036179	RBD	IPR036179	286	363	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
PF13895	Unmapped	-	289	360	Pfam	Immunoglobulin domain	-	-	-	-
cd00096	STR	DC_0826	302	355	InterPro cluster	Ig	C-terminal	Low	Positional only	1 proteins / 1 hits
DC_0894	RBD	DC_0894	360	445	Novel HMM	DC_0894	C-terminal	Low	Positional only	9 proteins / 9 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage EcS1 [NCBI]	2083276	Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kagamiyamavirus
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

BBC78246.1 [NCBI]

Genbank nucleotide accession

LC371242.1 [NCBI]

CDS location

range 113787 -> 115124
strand +

CDS

ATGGCTATTCCTTCAGTAACGATTACCCCAGTTAATGCCTCACCACAACTTGGTCAGACATTAACTATCAATTCAGTAGTTGAATTCGACCCAACAGATGTTTATACATCGTATAAATGGGAACTTTCTGGCGCAGATACAGGCGTTACTACTGCAACATACACTAAAGCCAATATCACAAGTGCTGATGCTGGTTCTTACGTATTAAAAGTTATGCATGGTGTTGATGCAGGTTCTGCAACTGAAACCGCTTCAAGTCCTGCCGTTATTACTACTTTACCGGCAACAACTGTTTCTATTGTTTCAACCACTACTGACATTTATGTCGGTGATACATTAACTATTACTGCTACCCCAACTGGTGTTCCTTCTGGCGCAACAGTAGGCGCATATGAATGGTCTAAAGGTGGTACTGTAGTTTCGGGCCAAACTACTTCTACATTGACTAAAACAGTTGCGGCTGGCGATGCCGGTTCTTATACTGCTAAAGTATCTTATACTGTAACAGGCCAAGCACCAATTAAAACTGCTGCATCTAATGCTATCTCTGTTACTGTTGGACCTGCATTAGCATTTGCTACTAACCTTAATGCAACAGCTTCTGTATCAACAGGCCAAGCTCTTACCCTAACTGTAGCAGCATCCGGTGGTAAATCTCCATATACATATCAATGGAAGAAAGGAAGTGCTAACATAGGAACTAATTTAAATACATTTATAGTTCCTTCTGCGGATTCAACAACTGCAGGAACTTATACTGTTGAAGTGACAGATGCTGCAAGTCATAAAATCACATCAGCTTCTTGTGTTGTTACAGTGGTGCCTGCTTTATCTTTGAGCACCGATTTGTCTGCGACTAAATCAGTTGTTTCAGGTAAAACTCTTACTCTAACTATTGTTGCAGCTAATGGCAAAACGCCTTATACATATCAATGGAAAAGAGCTGGCGTTGAAATCCCAAGTGAAACAGCTGCTACATTTACTAAATCTGCGTCACCAGCGGACGCAGGTACGTATACATGTGAAGTGACAGATGATAATAACGATAAAATCACATCTAATACATGTGTTGTAACTGTTAGTTTATTGCCTGATTTAGAAGTTCTTTGGACTGTACATCCTATCCCATGGCGAGATACAAGTTTCACTCCGTTAGGTTATTGGGTATTAGATGAAATCTTACTTCAAAAAGCTGATGGCAAAGACTGGAAAACTGATTACGCTACTTATCATTACACAGAAGAAGTTCAAACTATTTTAGAAGCATTTAATGCTATGGGTGAAGTTGAAATTCAAGACTCGCGTAATGGGTATATCCACAAAATGAGTTTAATTTAA

Genome Context

Tertiary structure

PDB ID

8c009b9dc12569e2f250c1fdb8fbe9e46670862573162b65108f993a624f1def

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8184

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Full genome sequencing of a novel polyvalent bacteriophage as one of T4-Family member	Kawasaki,T., Saad,A.M. and Yamada,T.	2018-07-28	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature