Protein

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UniProt accession
A5HL38 [UniProt]
Protein name
Putative variable tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPTSNKIVTVSGTGYTVDVTVCNLDADLTLKDFVVLHDGVLVSNANYTKTTRTILTYTGTALPSTTVEVRRRTPTNYILGARYGSRIRSDDWNKELDRITRRAEEYELNGVGAGSITGSQAPQNDPFGASWASDIVYPPTRQAVYSWGVNLVNATQLSSTLSSYVTNTALSTLLTNYALSASPSFTGNPTVPTQLTTDSSTRIANTAFVQNLIAGLNLPTTYAPLSSPTFTGTPSAPTPAAGNSTTRLATTAFVSQSQRPFVDATRNTTPQALAHNTYTTLVWNNEIRDSDGAYNSTTGAFTVPAGLGGYYEFTGAVLLSAGCSNLLVEIYVNGIPARRIGQSQGGSDVLFGTPFTGSVLLGAGDVVTLRCYQFNSSSASRDTLVTSSAFNWVTIKRLNV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 42552,81260 Da
isoelectric point:7,65737
aromaticity:0,08750
hydropathy:-0,10775

Domains

Domains [InterPro]
DC_0465
STR
1–221
DC_0465 DC_2167
Coil
Unmapped
89–109
Coil IPR001073
IPR008983
RBD
254–396
IPR008983
IPR008983
RBD
274–396
IPR008983
A5HL38
1 400
Architecture
STR
RBD
STR 1-221 | RBD 226-399 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Phormidium phage Pf-WMP3
[NCBI] 		2914005 Uroviricota > Caudoviricetes > Saffermanviridae > Wumptrevirus WMP3 >
Host Leptolyngbya foveolarum
[NCBI] 		47253 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABQ12464.1 [NCBI]
Genbank nucleotide accession
EF537008 [NCBI]
CDS location
range 16425 -> 17627
strand -
CDS
ATGCCAACGAGTAACAAGATAGTTACCGTCAGTGGTACAGGTTACACAGTAGACGTGACAGTGTGTAACCTAGACGCTGACTTAACACTAAAAGACTTTGTAGTACTTCATGACGGAGTACTCGTAAGTAACGCTAACTATACTAAGACGACTAGAACCATCTTGACCTATACGGGTACAGCGTTACCTTCTACGACTGTAGAAGTTAGACGAAGAACACCAACCAACTATATCCTTGGTGCAAGATATGGTAGTCGTATCCGTAGTGATGACTGGAACAAAGAGCTAGACCGTATCACTAGACGTGCTGAAGAGTACGAGCTTAACGGTGTAGGGGCTGGTAGTATCACTGGTAGCCAAGCACCACAGAACGACCCCTTTGGTGCGTCATGGGCTAGTGATATCGTTTACCCTCCGACAAGACAAGCTGTGTACAGTTGGGGTGTGAACCTCGTTAACGCAACACAGTTATCTTCTACGTTGTCGTCATACGTGACAAACACAGCACTGTCTACGCTGTTAACTAACTATGCGTTATCTGCTTCCCCTTCCTTTACGGGGAACCCAACAGTACCTACACAGTTAACGACAGACAGTAGTACACGTATCGCTAACACAGCGTTTGTTCAGAACCTTATCGCAGGGTTAAACTTACCGACAACGTATGCACCACTGTCTAGCCCTACGTTCACAGGTACACCATCTGCACCTACACCTGCTGCTGGTAACTCTACAACTAGGTTAGCTACTACAGCCTTTGTGTCTCAAAGCCAAAGACCGTTTGTAGACGCTACACGTAACACGACACCACAGGCGCTTGCTCATAACACATACACTACGCTTGTATGGAACAACGAGATCAGGGACTCTGACGGTGCGTATAACTCGACTACAGGTGCGTTTACTGTACCTGCTGGTTTGGGTGGTTACTATGAGTTCACTGGTGCTGTGTTGTTAAGTGCTGGCTGTAGCAACCTTCTCGTAGAGATCTATGTGAACGGTATACCAGCTAGACGTATAGGACAAAGCCAAGGAGGTAGTGATGTCTTGTTCGGTACACCCTTCACTGGTAGTGTGTTGCTAGGTGCTGGTGATGTGGTGACACTGAGATGCTACCAGTTCAACAGTTCATCAGCGTCTCGTGATACGTTAGTCACAAGCAGTGCGTTTAACTGGGTGACTATCAAACGCCTGAACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4edb08535e8ae58f0400a0e3ba3fe7ffe63ca4fa66e7bb0e57d8df4db97cf410
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8141
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 18443848 PubMed