Protein

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Genbank accession
WPJ20733.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATTPTNKPIPSEDPRDLKFNAGKIDEVVTSNAHYYTDRFGVRRWTIAGFQYTAEEAIRNYGYITMDSFEDGSTLTLPNQVLRYKATGEYYRWDGEFPKTVSAASTPETSGGVGLGAWVGVGDASLRADLSSKNGIKLIGGDLESYGADASGSIPCDNQLSQMLADKKFIVNSGTYLITSSHEVDISSLEYIEVGPDVEFIIRSNINGFIFKNPNANFDANGMRITVDIPGGGYTGIALTLRGSKYYTGPSNLGRLTQKNKFGPFYVFNRQGAVKQESASTPVTDEGYGFSIDCNSADEEILIWNEVDVSSTGFTVAHAIGVGTNPLNFISSLDLKLVAWFSTYHFRDTSIPQSGGNVAGGIGDVHVRLQSQPHAQMVKVVHMEHAPGFMSGCRFDLSIWDPNAYGYTSNVVDASVTNEYTNTMERKSYPLTRVLNMVDGSIFPVVNYTSSIQQSDILSSSDPELAKYLYLSTVTPEMTVLQACNAIKTWCNENNIRNNFEFKVFLGDSTVDIRNVFLPWITAIGDYSGYLHLYATFYNGIINTVRVEYEVNPITSGGKTEKHEILWTNTTGLVSHRLIEYSFGTTAEIKSKVAIQTKGFTTFDSTFNIPVWYNGNNSWLKADGSVAYSI
Physico‐chemical
properties
protein length:630 AA
molecular weight: 69361,64320 Da
isoelectric point:5,11388
aromaticity:0,11587
hydropathy:-0,22937

Domains

Domains [InterPro]
DC_1559
ATT
1–180
DC_1559
G3DSA:2.10.10.80
ATT
62–133
G3DSA:2.10.10.80
IPR040775
RBD
63–123
IPR040775
WPJ20733.1
1 630
Architecture
ATT
ATT 1-180 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ20733.1
1 630
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,9927
Central domain 158 446 290 0,9689
C-terminal 447 630 183 0,7772
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-446
C-terminal
447-630

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_AB4P2
[NCBI] 		3076812 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ20733.1 [NCBI]
Genbank nucleotide accession
OR544125.1 [NCBI]
CDS location
range 31102 -> 32994
strand +
CDS
ATGGCTACCACACCAACTAATAAACCAATTCCGTCAGAAGACCCGCGCGACCTCAAGTTTAACGCAGGGAAAATCGACGAGGTGGTAACATCTAACGCGCATTACTACACCGACCGCTTCGGAGTTCGCCGCTGGACAATTGCTGGCTTCCAATACACCGCAGAAGAAGCTATCCGTAACTACGGCTACATCACAATGGATAGTTTCGAAGATGGCTCGACACTGACATTACCAAATCAGGTGTTGCGATATAAAGCTACTGGTGAGTATTACCGTTGGGATGGCGAATTTCCTAAAACTGTTTCTGCCGCTTCAACTCCTGAAACTTCCGGCGGGGTTGGTTTGGGTGCGTGGGTTGGTGTAGGTGATGCATCATTACGAGCAGATTTATCGTCAAAGAATGGAATAAAATTAATAGGAGGCGACCTTGAATCATACGGAGCAGATGCTTCTGGATCAATTCCATGTGACAACCAACTTTCACAAATGCTAGCTGATAAAAAATTCATAGTTAACTCTGGTACTTACCTAATAACATCATCTCATGAGGTTGATATTTCATCCCTTGAATATATCGAGGTTGGCCCGGACGTTGAATTTATCATTAGAAGCAATATCAACGGATTTATATTTAAGAATCCAAACGCCAATTTCGACGCAAACGGAATGCGGATAACCGTAGATATCCCGGGCGGTGGGTACACTGGAATAGCCTTAACTTTAAGAGGTAGCAAATACTACACCGGACCTTCTAATCTTGGGCGATTAACCCAGAAGAATAAATTCGGTCCTTTTTACGTGTTTAACCGACAAGGAGCCGTTAAACAAGAATCTGCTTCTACTCCTGTTACCGATGAGGGGTACGGCTTCTCTATAGACTGCAACTCAGCAGATGAAGAAATACTGATATGGAACGAAGTTGATGTCTCATCCACTGGGTTTACTGTGGCTCATGCAATAGGCGTAGGAACAAATCCACTTAACTTTATTTCATCTCTTGACCTTAAGTTGGTAGCCTGGTTCAGTACATATCATTTCAGGGATACCAGCATCCCGCAATCTGGTGGCAACGTAGCTGGAGGAATTGGTGATGTGCATGTGCGATTACAATCACAACCTCACGCTCAGATGGTTAAGGTTGTGCATATGGAACACGCGCCTGGATTTATGAGTGGCTGCCGATTTGACCTATCAATCTGGGATCCTAACGCCTACGGCTATACCTCTAATGTGGTCGATGCATCCGTGACAAACGAATATACAAATACTATGGAGCGGAAATCCTACCCGTTAACTCGAGTGCTGAATATGGTAGATGGTAGTATATTCCCGGTAGTGAATTACACCAGTAGTATCCAGCAGTCGGATATACTTTCCAGTAGTGACCCTGAGCTGGCTAAGTACTTGTACCTGTCAACAGTAACTCCAGAAATGACGGTGCTACAGGCGTGTAATGCCATTAAAACATGGTGTAACGAAAATAACATCCGTAATAATTTTGAATTCAAAGTGTTTTTAGGTGACTCTACCGTCGATATACGTAACGTTTTTCTCCCGTGGATAACAGCTATAGGTGACTACTCCGGATACTTACATCTATATGCTACTTTTTACAATGGCATTATAAATACAGTGCGTGTCGAGTACGAGGTTAATCCTATAACCAGCGGTGGAAAGACAGAGAAACACGAAATATTATGGACAAACACAACAGGTCTTGTGTCGCATCGCCTGATTGAGTACTCATTCGGCACCACTGCTGAGATAAAAAGCAAGGTAGCCATACAGACAAAAGGGTTCACAACTTTCGACTCTACTTTTAACATACCTGTTTGGTATAATGGAAATAATTCATGGCTTAAAGCAGACGGTTCTGTGGCATATTCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52ab6934a7acf84c41019b4804cc3522d1f7449f6a16897b7c827ea7d6c42144
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6616
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The biological characteristics and genomic analysis of a novel Acinetobacter baumannii phage vB_AbaM_AB4P2 Tan,Y. 2023-05-11 — GenBank