Protein

View in Explore
Genbank accession
CAY90197.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
SEPCVKYYDGILYLTTRGTLSTQPGSSLHRSSDLGTSWNSLRFPNNVHHSNLPFAKVGDELIIFGSERAFGEWEGGEPDNRYAGNYPRTFMTRVNVNEWSLDNVEWVNVTDQIYQGGIVNSAVGVGSVCIKDNWLYYIFGGEDFLNPWSIGDNNRKYPYVHDGH
Physico‐chemical
properties
protein length:164 AA
molecular weight: 18546,17040 Da
isoelectric point:5,08291
aromaticity:0,14024
hydropathy:-0,52561

Domains

Domains [InterPro]
IPR036278
STR
1–164
IPR036278
G3DSA:2.120.10.10
STR
1–164
G3DSA:2.120.10.10
IPR024428
ENZ
1–164
IPR024428
IPR001724
Unmapped
67–93
IPR001724 IPR001724
CAY90197.1
1 164
Architecture
STR
STR 1-164
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAY90197.1
1 164
Domain Start End Length (AA) Confidence
N-terminal 1 36 36 0,1491
Central domain 37 153 118 0,6992
C-terminal 154 164 10 0,5137
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-36
Central
37-153
C-terminal
154-164

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage CUS-3
[NCBI] 		539221 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli RS218
[NCBI] 		439184 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAY90197.1 [NCBI]
Genbank nucleotide accession
FN394218.1 [NCBI]
CDS location
range 539 -> 1030
strand +
CDS
TCTGAGCCATGTGTAAAATATTATGATGGCATTTTGTATCTGACGACCAGGGGGACATTAAGTACTCAACCCGGTAGTTCATTGCACAGAAGCTCTGATTTAGGTACATCATGGAATTCTCTTCGCTTCCCAAATAATGTTCATCACTCAAACCTTCCTTTTGCCAAAGTTGGCGATGAGCTGATTATTTTTGGCAGTGAGCGCGCATTTGGTGAGTGGGAAGGAGGAGAACCTGATAACCGTTATGCAGGAAACTATCCAAGAACATTTATGACCAGAGTTAACGTCAATGAGTGGAGTCTGGATAATGTAGAGTGGGTTAATGTTACTGATCAGATTTATCAGGGCGGAATAGTTAACTCTGCGGTTGGTGTTGGTTCAGTTTGTATCAAAGACAACTGGCTGTACTACATTTTCGGTGGGGAAGACTTTCTAAACCCATGGAGCATAGGGGATAACAACAGAAAATATCCTTATGTTCACGATGGTCAC

Genome Context

Genome Context

Tertiary structure

PDB ID
9241d3363475bc6aed1f892c410c24df165c0808b1eafbb1b9a9fea37dec6dfc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6349
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
O-acetyltransferase gene neuO is segregated according to phylogenetic background and contributes to environmental desiccation resistance in Escherichia coli K1 Mordhorst,I.L., Claus,H., Ewers,C., Lappann,M., Schoen,C., Elias,J., Batzilla,J., Dobrindt,U., Wieler,L.H., Bergfeld,A.K., Muhlenhoff,M. and Vogel,U. 2009 19671077 GenBank