Protein

View in Explore
Genbank accession
ALP46961.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYERLKRDGDWLLIFRHDSTGGVFFTSDAEARSVGTDPDVEQKFSALNSLEEFRREDGKFQFKLHYPELDVTNIWKQSSNFAAIDVGQYLTNGNLAGGEYVTEQNAKIGSWVIVEKENPGSSKYVVEQPTAALEDQLRFQVPQSRLLPNKTYTLSCWVGYEVDTDHDTAAIFHARWYDGSNNDYTLGEHTAGDVFESAGNELIIDGILWKRHYARFTTPSTLSSSSMYWYCCYTTDTGKLPTGKRWLTNFMITDSQIVKNYTGDYDATTRGVRGYEPIYIESTANDWGGIEYSVSASTFADGSVDISNWYWAIGAKRSWPDGATTFPGPGINVNQAELWVYAPVGSRIGEYEVSARHIRDFSNNNIRLLATGVADGSSNLASCYINDVSVFTPEAKQQYQVRLIIFNDDMTVKTNRKYLLSSSTERSNFINGLNGLTTEPFVILSNGSMYADSAVDAAIQQYHPIEYRASSYFSQYSYSYCAFGTGQLGIVYDRCMFDHESDGDSVVDTAFEDKAGIGSNGYGIPLIETMTVPTDTRQLLSDYGVIDGQYLIYKARACIDRNSAIANEDKMANLRFYNVVGDEVGRQNIHFYSAEKKETQEFFVQVPTGAVKFAVWSNLQPEYFDYVILTKGGMSTPSGIPHMISNINGIAAQEIVNSPITGNVVDDDSWWRAYNADSNLYAGINMPVQEIDNVQWGNYVLSGGEKCFTRTAGSSSPIEMQEVSIDPSRPYFLSLWVNAIDKQNSFLYFSVRVKNSSGDYRTLRLSDGSRTSTYINVDRVYGFPASNNQWVLLQGYILPHDWTDAQHQAFADKFNNYFGVINPEDDPTYQTSKGVGYYTTNADKSFRWNADDDKLILRYKDETAVENQVMWAFPIVTEVNVASSFEDNFTAIDFAMK
Physico‐chemical
properties
protein length:897 AA
molecular weight: 100896,41390 Da
isoelectric point:4,70459
aromaticity:0,13266
hydropathy:-0,40691

Domains

Domains [InterPro]
DC_0580
ATT
1–88
DC_0580 DC_0912
G3DSA:2.60.120.260
STR
87–254
G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
87–265
G3DSA:2.60.120.260
ALP46961.1
1 897
Architecture
ATT
STR
STR
ATT 1-88 | STR 89-265 | STR 337-771 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP46961.1
1 897
Domain Start End Length (AA) Confidence
N-terminal 1 265 265 0,2471
Central domain 266 480 216 0,8096
C-terminal 481 897 416 0,3145
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-265
Central
266-480
C-terminal
481-897

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-Grn1
[NCBI] 		1747713 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46961.1 [NCBI]
Genbank nucleotide accession
KT919972 [NCBI]
CDS location
range 101512 -> 104205
strand -
CDS
ATGTACGAAAGACTTAAACGTGACGGCGATTGGCTATTAATCTTTCGCCATGATTCAACAGGAGGTGTGTTTTTCACCTCCGATGCTGAAGCACGCAGCGTCGGGACAGATCCCGACGTTGAACAAAAATTCAGTGCGTTGAACTCACTTGAGGAATTTCGCCGTGAAGACGGCAAATTCCAATTCAAGCTTCATTACCCAGAATTAGATGTAACAAACATTTGGAAGCAAAGCAGTAACTTTGCAGCTATTGATGTAGGTCAATATCTTACAAACGGTAACTTAGCGGGTGGGGAATACGTCACTGAACAAAATGCAAAAATCGGTTCTTGGGTTATTGTTGAGAAAGAAAACCCAGGGTCATCAAAATACGTCGTTGAGCAACCGACTGCGGCACTAGAAGATCAATTACGTTTTCAAGTTCCACAATCACGTTTACTACCAAATAAAACATATACATTATCATGTTGGGTTGGGTATGAAGTAGACACTGATCACGATACGGCAGCTATATTTCACGCTCGTTGGTATGATGGCTCAAATAATGACTATACATTAGGCGAACATACTGCGGGTGATGTGTTTGAATCGGCAGGAAACGAGTTGATAATTGACGGGATTCTTTGGAAGCGTCATTATGCTCGTTTCACAACGCCTAGTACTCTTTCATCGAGTAGCATGTACTGGTATTGTTGTTATACAACTGATACAGGTAAATTACCAACAGGTAAGCGTTGGCTTACAAACTTCATGATTACAGACTCGCAAATCGTCAAAAACTATACTGGCGATTACGACGCTACAACTCGCGGCGTTAGAGGCTATGAACCGATTTACATCGAAAGCACTGCAAATGATTGGGGTGGAATAGAATATAGCGTTTCAGCCAGTACGTTCGCTGATGGTTCAGTTGACATATCAAATTGGTATTGGGCTATTGGTGCAAAACGTTCTTGGCCAGACGGGGCTACTACATTCCCGGGACCTGGTATAAACGTTAATCAAGCTGAATTGTGGGTATATGCTCCTGTTGGTTCTAGAATCGGTGAATATGAAGTGTCAGCTAGACATATCAGAGATTTTTCAAACAATAATATCAGACTGTTAGCAACAGGGGTCGCGGACGGAAGTTCAAACCTAGCATCATGTTATATAAACGATGTTAGCGTATTCACACCCGAAGCTAAACAACAATATCAAGTTCGTTTGATTATATTCAACGACGATATGACAGTCAAAACTAATAGAAAATATCTTCTGAGTAGTTCTACAGAACGTAGCAACTTCATCAACGGTCTGAACGGGTTAACAACAGAGCCGTTTGTTATTCTATCAAATGGGTCAATGTACGCAGATTCTGCGGTAGATGCTGCAATTCAACAGTATCACCCGATTGAGTATCGCGCTAGCTCTTACTTCAGTCAATACAGTTATAGTTACTGTGCATTCGGTACAGGTCAATTAGGTATTGTATATGATCGTTGTATGTTCGACCATGAATCTGACGGTGACAGTGTTGTTGATACTGCATTCGAAGATAAAGCAGGGATTGGTTCAAACGGGTACGGAATTCCTCTAATCGAAACAATGACTGTTCCTACTGATACACGTCAACTTCTTTCAGATTATGGCGTGATAGACGGACAGTACTTGATTTACAAAGCTCGTGCATGTATTGATCGAAATTCAGCAATCGCAAATGAAGACAAAATGGCGAATCTTCGATTCTACAACGTAGTTGGCGATGAAGTCGGCAGGCAGAATATTCATTTTTACAGTGCAGAGAAAAAAGAAACTCAAGAATTTTTCGTACAAGTACCAACAGGTGCAGTTAAATTTGCAGTTTGGTCTAACTTACAACCAGAGTACTTTGATTACGTCATATTGACTAAAGGCGGAATGTCAACCCCGAGTGGTATACCTCATATGATTTCGAACATAAACGGTATCGCTGCTCAAGAGATTGTCAATTCACCGATTACAGGTAACGTAGTTGATGACGATAGCTGGTGGCGAGCATATAACGCAGATTCAAACTTGTATGCAGGTATTAATATGCCAGTACAAGAAATTGACAACGTTCAATGGGGTAATTATGTGCTTTCAGGCGGTGAAAAGTGTTTCACACGTACAGCAGGCTCATCATCTCCGATTGAAATGCAAGAAGTATCAATCGACCCATCTCGACCATACTTCTTATCGTTATGGGTTAATGCTATAGACAAGCAAAATAGCTTCTTATATTTCAGTGTACGTGTCAAGAATTCATCTGGTGACTATAGAACTCTGAGATTATCAGACGGTAGTCGAACATCTACATATATCAATGTTGACAGAGTGTACGGGTTTCCTGCTTCAAACAATCAATGGGTTTTATTGCAGGGGTATATTCTACCACATGATTGGACAGATGCACAACATCAAGCGTTTGCTGATAAGTTTAACAACTATTTCGGTGTAATAAACCCAGAAGATGATCCGACATATCAGACATCAAAGGGTGTAGGTTATTACACCACAAACGCAGACAAGTCTTTTAGATGGAATGCTGATGATGATAAGTTGATACTTCGATACAAAGATGAAACAGCCGTTGAAAATCAAGTAATGTGGGCTTTCCCAATTGTTACTGAAGTCAATGTTGCTAGTTCGTTTGAAGACAACTTCACTGCAATCGACTTTGCAATGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7aaf4675d36d4979a9da645906fc98a479ebc64df1dc8e980043b7db2d52a848
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative Functional Genomic Analysis of Two Vibrio Phages Reveals Complex Metabolic Interactions with the Host Cell Skliros,D., Kalatzis,P.G., Katharios,P. and Flemetakis,E. 2016 27895630 GenBank