Protein

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Genbank accession
WKV16852.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALPNGSQIFIEQTRSATEIDASKVSNADDPVATVTSTTGIVKGDYVLVLESVWAAFKNRVMRVKEVVSDTSITLEGDKNTSTADLNKFPAGGASTFVKIESWIEIPCVSDIAKSGGEQQFYTKQCFSDYREKQIPTFKSATSIAYTFDFDYANPITQLLIGYDEDGKTRAMRMFVPKASYPIRTFSGTPSFDDIPNTVMNEDETTILTISLDGKYTHMKESE
Physico‐chemical
properties
protein length:223 AA
molecular weight: 24659,39230 Da
isoelectric point:4,74551
aromaticity:0,09865
hydropathy:-0,30628

Domains

Domains [InterPro]
DC_0037
ATT
1–51
DC_0037 IPR014918
WKV16852.1
1 223
Architecture
ATT
TAS
ATT 1-51 | TAS 52-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKV16852.1
1 223
Domain Start End Length (AA) Confidence
N-terminal 1 217 217 0,5984
Central domain 218 217 1 0,0747
C-terminal 218 223 5 0,9676
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-217
Central
218-217
C-terminal
218-223

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PH1062
[NCBI] 		3038279 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKV16852.1 [NCBI]
Genbank nucleotide accession
OQ680139 [NCBI]
CDS location
range 9081 -> 9752
strand -
CDS
ATGGCACTTCCTAACGGTTCCCAAATCTTTATTGAGCAGACCCGATCCGCTACTGAAATTGACGCAAGCAAAGTAAGCAACGCGGATGATCCGGTAGCAACTGTTACATCGACCACTGGCATTGTGAAAGGCGATTACGTCCTGGTGCTGGAAAGCGTATGGGCTGCATTCAAAAACCGCGTAATGCGCGTAAAAGAAGTGGTTAGCGACACATCAATCACGCTTGAAGGCGACAAGAACACTTCCACGGCTGACCTTAACAAGTTCCCCGCTGGCGGCGCTTCCACTTTCGTTAAGATCGAAAGCTGGATTGAGATTCCATGCGTGAGCGACATCGCAAAATCTGGTGGCGAGCAGCAGTTCTATACCAAGCAGTGTTTTTCAGATTACCGTGAAAAGCAGATCCCGACCTTTAAATCTGCGACGTCCATCGCGTATACGTTCGACTTCGACTACGCCAACCCAATCACGCAGCTTCTGATTGGTTACGACGAAGACGGCAAGACGCGCGCTATGCGAATGTTTGTACCGAAGGCAAGCTATCCGATCCGCACCTTCTCTGGCACGCCATCTTTCGATGACATCCCTAACACGGTGATGAACGAAGATGAAACGACCATCCTGACCATCTCGCTTGATGGCAAATACACGCACATGAAAGAATCTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a0963473f6bf48411b03ebaf524ea8385d6d7518436e31cd732cfa10fa63929
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9051
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50