Protein

View in Explore
Genbank accession
QPB08537.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MAQDKFFEYSELDFIQAGEGVKGSIAQGDDGEANRVPSQVGKNTLFLKQRMDVLAHASHPTITTSTPGSFTANRNVNIAKAGTYSMPDGAAIGSVVNLKAHVDGVVITTTTEFVAHQYTSLNLKKNQSAQFVKTASGWDDVNLHGTFSERLGHTQLNRTVELVTMTDGTSYDNKPTGWTRKINKAGSAGVPPDLSDYAHLTCIASRSEGESSWLLIDASKSSTKMWFGFKSSVGEVPVWNRFYNDNQKPTPYELGAARKNGDTSQNFAARQLILPTSTGTIGGSDITKGRIYLGGPSKGLGIDDNEIYTKGDHLIIGVVDPEYSVVIRNGSTDNIASFRDSQISFHKTLYVEDKKAYTVNSQGGFNKLREYEDSYWRAANNTLYFNQSTTSARAIVANTSTMYLNYEQGFSNGISVSGKFLVPDLVIGAHGSVKGQLSKVIMQDHGNGNVTLSATNGNLYLGYQNTEKVFLATDLYNGDGTIKIIDKVTARVYDEGNRVYSPTNKPTYQDMSLDDRYIQYDYLGGATYPRLKPVSGPWLRVGDGSMTSGGLLPYSKDGNTTIGTSTWRFYSAYINNIFEGDVNIADKYLRKDSVDDDFDNAIVSKQRHGGLFGNYKSTLIDHIWGMGTSYRIGTDGLSFGNFYGAAYKYNDVGGSVHAGGHQFVWVQNGQPHVALGNNIWAKNDIISDSDMVFTDYLKRGSKRVIGGTSDDWVRVNPAGDYAAGMLVKGDIRTEDGKITYRGFTSDDSTKMGGSTDTSWGNNGTAAFSHRRGDSSSAHWLIASYIDAVNIRAGIQVLSRESGVMRFYTNGRTKHIAMEAGNVYLESPSIQSTDERSLICRGWALNNLLGINAKAVDSDKLDGLNSTQFLRSDVDDTFTASSLEFSSGDLKFLGSGNGVGWNSNGGSSAIRFESSPTASDLLDFRITNTGGELFRWTGVTSGADVTWATLRDDLFSLPSQDLKVVRTGAKSNHLISSTSENVVTLDSGVNTDSTLYITEYNGLHGTFIKYQGSDSNVSKFGVRSEGADFVAFEIARSSTPYVNFLKVPKVNGTLLARVTDKVADSDKLDGIQGSQFLRRDASGTVTEGTYYNLEIYSGLKRSDPNSTGAANVLLVRDYVELNAGRSDKDVLLGWADTGNIRVCVDLVGRDGSTKIADANGKTYDEGVALTTKYARRNGEADQDFQGKVVTAKEKVVVGTDIEIRKNADGSLGFYL
Physico‐chemical
properties
protein length:1214 AA
molecular weight: 131950,52230 Da
isoelectric point:5,90389
aromaticity:0,09720
hydropathy:-0,41491

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB08537.1
1 1214
Domain Start End Length (AA) Confidence
N-terminal 1 676 676 0,1325
Central domain 677 875 200 0,2754
C-terminal 876 1214 338 0,7646
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-676
Central
677-875
C-terminal
876-1214

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Va2
[NCBI] 		2783668 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB08537.1 [NCBI]
Genbank nucleotide accession
MW073017 [NCBI]
CDS location
range 56375 -> 60019
strand +
CDS
ATGGCTCAAGATAAATTCTTTGAGTACTCTGAACTCGACTTCATACAAGCTGGTGAAGGTGTAAAAGGTAGTATCGCTCAAGGTGATGACGGCGAGGCTAACCGAGTTCCCTCTCAAGTAGGTAAGAATACACTCTTCTTGAAACAACGTATGGATGTCTTAGCTCATGCAAGTCATCCAACTATTACAACATCTACTCCAGGATCATTCACAGCTAACCGAAATGTGAACATTGCTAAGGCTGGAACGTATTCTATGCCTGATGGTGCTGCAATCGGTTCAGTAGTTAACTTGAAAGCTCATGTGGATGGAGTAGTTATTACAACTACGACTGAGTTCGTAGCTCATCAATATACATCATTAAATCTTAAGAAGAATCAATCTGCCCAGTTCGTTAAGACAGCATCAGGTTGGGATGATGTTAATTTACACGGTACTTTTTCTGAACGTCTAGGTCACACTCAGTTGAACCGAACTGTAGAACTTGTGACTATGACTGATGGTACGTCTTACGACAATAAACCTACAGGTTGGACTCGTAAGATTAATAAAGCAGGTAGTGCAGGTGTGCCTCCTGATTTATCAGACTACGCACACTTAACATGTATCGCTTCTAGAAGTGAAGGTGAAAGTTCTTGGTTGTTAATCGATGCATCTAAGTCTAGCACTAAGATGTGGTTCGGTTTCAAGTCATCAGTAGGTGAAGTTCCAGTATGGAATCGATTCTATAATGACAACCAGAAACCTACACCGTATGAGTTAGGTGCTGCTCGTAAGAATGGTGACACTTCTCAGAACTTTGCAGCTAGACAGTTGATTCTACCGACTTCAACTGGTACTATCGGTGGTTCTGATATCACTAAAGGTAGAATCTACCTTGGTGGTCCTAGTAAAGGTCTAGGTATTGATGACAATGAGATTTACACTAAAGGTGATCATCTTATCATCGGTGTAGTAGATCCAGAATATTCTGTAGTTATCCGTAACGGTTCTACAGACAACATTGCATCATTCAGAGATTCTCAAATCTCTTTCCACAAAACTCTTTACGTAGAAGATAAGAAAGCTTACACAGTAAATAGCCAAGGTGGCTTCAATAAACTAAGAGAGTATGAAGATAGTTACTGGAGAGCTGCCAATAACACTCTGTACTTCAACCAGAGTACAACTAGCGCTAGAGCAATCGTAGCTAATACTTCGACTATGTATTTGAACTATGAGCAAGGTTTCTCTAACGGTATCTCAGTATCTGGTAAGTTCTTAGTCCCTGACTTAGTTATCGGTGCTCATGGTTCTGTAAAAGGTCAGTTAAGTAAAGTTATCATGCAAGATCATGGTAACGGTAATGTGACACTCTCTGCCACTAACGGTAATCTATATCTAGGTTACCAGAATACAGAGAAAGTCTTCTTAGCTACTGACTTGTACAACGGTGATGGAACTATAAAGATCATCGATAAAGTCACTGCCAGAGTCTATGACGAAGGAAATCGAGTCTACTCACCGACGAATAAACCTACGTATCAAGATATGAGTCTGGATGATAGATACATTCAGTATGATTATCTAGGTGGTGCTACTTACCCTAGGCTAAAACCTGTCTCAGGTCCTTGGTTAAGAGTTGGCGACGGTAGCATGACTTCAGGAGGTCTTCTTCCTTATTCTAAAGATGGCAATACTACTATAGGCACTTCCACTTGGAGATTCTATAGTGCTTACATCAACAATATCTTTGAAGGTGATGTCAACATTGCTGACAAGTACCTACGAAAAGATTCTGTAGATGATGACTTCGATAATGCTATTGTATCAAAACAAAGACACGGTGGCTTGTTCGGTAACTACAAGAGTACTCTAATCGACCATATCTGGGGTATGGGTACATCTTATCGAATCGGTACTGACGGTCTATCTTTTGGTAACTTCTACGGTGCTGCTTACAAGTACAACGACGTAGGTGGTAGTGTTCACGCAGGTGGTCACCAGTTCGTTTGGGTTCAGAATGGTCAACCTCACGTAGCTCTAGGTAATAATATCTGGGCTAAGAACGACATCATCTCTGATAGTGATATGGTATTCACTGACTACCTTAAACGTGGTAGTAAAAGAGTTATTGGTGGGACTTCTGATGACTGGGTGAGGGTCAATCCGGCAGGTGATTACGCAGCAGGCATGCTCGTAAAAGGTGACATCCGAACTGAAGACGGTAAGATTACTTATCGAGGATTCACTTCTGACGACTCCACTAAGATGGGTGGTTCTACTGACACGTCTTGGGGTAATAATGGTACTGCTGCATTCTCTCATAGACGAGGTGACTCATCCAGCGCACACTGGTTGATTGCTTCTTATATTGATGCAGTGAACATCCGTGCTGGTATCCAAGTCCTGTCCAGAGAGTCTGGTGTGATGAGGTTCTACACCAACGGTCGTACTAAGCATATCGCTATGGAAGCTGGTAACGTCTACTTAGAGAGTCCAAGTATTCAGTCAACTGATGAACGTTCTCTTATCTGTAGAGGTTGGGCACTTAATAACTTACTAGGTATCAATGCTAAAGCAGTCGACTCTGATAAATTGGATGGATTGAATTCAACTCAGTTCTTACGTTCTGATGTTGATGATACCTTTACAGCTAGTTCTCTAGAGTTCTCCTCTGGTGATCTTAAGTTTCTAGGTAGCGGTAATGGAGTAGGTTGGAATTCTAATGGTGGTTCTTCTGCTATCAGATTTGAGTCTTCTCCTACAGCTTCTGACTTACTGGACTTCAGAATTACTAACACTGGTGGTGAGCTATTCCGATGGACTGGTGTGACTTCAGGTGCTGATGTAACTTGGGCAACCTTGAGAGACGACTTGTTCTCATTACCTTCCCAGGATTTGAAAGTAGTAAGAACAGGTGCTAAAAGTAACCACTTAATCAGTTCTACTTCTGAGAACGTAGTTACTCTTGATTCAGGTGTCAACACTGACTCAACTCTTTACATCACTGAGTACAATGGTCTACATGGTACTTTCATCAAGTATCAAGGTTCTGACTCTAATGTTTCTAAGTTCGGTGTTCGTTCAGAAGGTGCTGACTTTGTAGCATTCGAGATAGCTAGATCATCAACTCCTTATGTTAACTTCCTAAAAGTGCCTAAAGTCAACGGTACTCTTCTAGCGAGAGTAACTGATAAAGTCGCAGACTCAGACAAACTTGATGGTATTCAAGGTAGTCAATTCTTAAGAAGAGATGCTAGTGGAACTGTAACTGAAGGAACTTACTACAATCTTGAGATTTATTCAGGTCTTAAGCGTTCTGATCCTAATAGTACAGGTGCAGCTAACGTCCTTCTCGTAAGGGACTATGTTGAGCTTAACGCAGGTCGTAGTGATAAAGACGTACTTCTTGGTTGGGCTGATACTGGTAATATCAGAGTTTGTGTGGATTTAGTAGGTCGTGATGGTTCTACTAAAATTGCAGATGCTAATGGTAAGACCTATGATGAAGGTGTTGCTCTGACAACTAAATACGCTCGTCGTAATGGTGAAGCTGACCAGGACTTCCAAGGTAAGGTTGTAACTGCTAAAGAGAAAGTCGTAGTAGGTACTGACATCGAGATTCGTAAGAATGCTGATGGTTCTTTAGGTTTCTACTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa8a803d6769562e64ee3d115bfde32b0b367bc79f3c44bdb344e7d6401223f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4739
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50