Protein

View in Explore
Genbank accession
QSM01416.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNSFLKSILNTPTLTIRNDVTKLPVWKSLQVKKVEIYSPASVVSKPLATKDQTEAQVYTEALDIDVKNGKIIQPVRLRINAICPDLSTVESIMNAFNDNTSTFAITSKSILADKMAIMTLDVDQSPDMLNAAEINMEFEQVEPPVLNEFDPAFPQDSPTYGVQIQSLSDANLLDLGAIGDSISSAAKSLYNRVTSYF
Physico‐chemical
properties
protein length:197 AA
molecular weight: 21650,42870 Da
isoelectric point:4,52236
aromaticity:0,06599
hydropathy:-0,07157

Domains

Domains [InterPro]
IPR054442
ATT
3–194
IPR054442
QSM01416.1
1 197
Architecture
ATT
ATT 3-194 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_V524
[NCBI] 		2813169 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM01416.1 [NCBI]
Genbank nucleotide accession
MW595221.1 [NCBI]
CDS location
range 22523 -> 23116
strand +
CDS
TTGAACTCTTTCCTCAAGTCTATTCTCAACACGCCTACTCTCACCATACGCAATGATGTTACCAAACTTCCTGTCTGGAAGAGTCTTCAAGTCAAGAAAGTGGAAATTTACTCGCCGGCTTCCGTAGTGTCGAAACCTCTGGCGACGAAAGACCAGACGGAAGCTCAAGTGTACACCGAAGCTCTGGACATTGATGTGAAGAATGGAAAGATCATCCAACCGGTGCGACTCCGCATCAATGCTATCTGTCCGGACCTGTCCACCGTTGAAAGTATCATGAACGCTTTTAATGATAACACCTCGACTTTCGCTATCACTTCTAAGTCGATATTGGCCGATAAAATGGCCATCATGACGCTCGATGTAGATCAGTCTCCAGACATGTTGAACGCGGCTGAGATCAATATGGAATTCGAGCAGGTTGAGCCTCCAGTATTGAATGAATTCGATCCTGCGTTCCCTCAAGATAGTCCGACTTATGGGGTGCAGATTCAATCTCTTTCTGATGCTAATTTGCTGGATTTGGGCGCCATCGGCGATTCGATATCTTCGGCCGCAAAATCGCTATATAATCGCGTGACCAGCTACTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f9c5e62873b34ac1f8755b4f853851bdad44d0f7d852cd6924cff06a4c1926e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage control of Pseudomonas aeruginosa in water Kauppinen,A., Siponen,S., Pitkanen,T., Holmfeldt,K., Pursiainen,A., Torvinen,E. and Miettinen,I.T. 2021-05-17 — GenBank