Protein

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Genbank accession
AVH85077.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MQMTVTRALAELKTLSNRIAQAQAQTFVTLGKGKSEVPTVKQFKDKAEAEKTLSASFQSVRSLMARRAAIKEAIVASNASTKVTIGDKTMTVAQAIERKGSIQFDKELLASMRSQLARAETELTRNDQDIEAKVEAQLVAMAGGQQGHKVDADQQKVIRQGFEDSIKLKLLDPIGIRTEIEKLNTSIAEFELEVDHVLSESNALTKIEIAD
Physico‐chemical
properties
protein length:211 AA
molecular weight: 23128,18880 Da
isoelectric point:6,78063
aromaticity:0,02844
hydropathy:-0,31754

Domains

Domains [InterPro]
DC_0027
STR
1–211
DC_0027
Coil
Unmapped
5–25
Coil Coil Coil
AVH85077.1
1 211
Architecture
STR
STR 1-211
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85077.1 [NCBI]
Genbank nucleotide accession
MG752970.1 [NCBI]
CDS location
range 99087 -> 99722
strand -
CDS
ATGCAAATGACCGTTACCCGCGCACTAGCCGAATTGAAGACTCTGAGCAACCGCATTGCACAAGCACAAGCCCAAACATTCGTCACCCTGGGTAAGGGTAAGAGCGAAGTTCCTACCGTGAAGCAGTTTAAGGATAAGGCTGAAGCCGAGAAGACTTTATCGGCGTCTTTCCAGTCTGTACGTAGCCTGATGGCGCGTCGCGCAGCCATCAAGGAAGCAATTGTTGCATCAAACGCGTCAACGAAGGTGACCATCGGTGACAAGACGATGACGGTTGCTCAGGCAATTGAACGAAAGGGTTCAATTCAATTCGACAAGGAATTGCTTGCTTCGATGCGAAGCCAACTCGCTCGCGCAGAAACGGAACTAACCCGCAACGATCAAGATATCGAAGCGAAGGTTGAGGCTCAGCTTGTAGCAATGGCTGGTGGTCAACAAGGTCACAAGGTTGACGCAGATCAGCAAAAGGTTATCCGTCAAGGATTTGAAGATTCAATCAAGCTGAAGCTGCTTGATCCAATTGGTATTCGTACCGAAATTGAAAAGCTGAATACCAGCATCGCTGAGTTCGAGCTTGAAGTTGATCACGTTTTGTCAGAGTCAAATGCTCTAACAAAGATCGAGATTGCCGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e4ee1dd8dec3e26058d4c6644f52cf0e0e0ef2a3aeb0415f72be1a4087c74e24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank