Protein

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Genbank accession
AUS00797.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MSIRKDVDYPGRWDAATTEYPMGKPKNRTTSTSKDGSYLEKKWIGDYEALLGAALGETGETPNGVQDTALDSQIYKAMQKGRQVLPFNLDWNGFMDPSHQSSLPSPSGYPGNSSGGEAVYSSGDEITLGVFSGSDLNSVSSDDDGWIFSGSIYKEYSLTTEQVSSIDVDSINVYIRGQDGSKHFASNQTSGVTVTKPSTSTIRVEIDSSIFSSLGITKLWRFFVSERLGQVVELSPSKSEAAIRGGRVRVSNSDFTMYIYPDGSFYASGIIGTGTTTPFSASIPIPININESVVTCTPRSSVPAGNGVTASLDNSNTLTIYKENTSLSLSIYTTISGNIL
Physico‐chemical
properties
protein length:340 AA
molecular weight: 36471,84320 Da
isoelectric point:4,78052
aromaticity:0,09118
hydropathy:-0,32294

Domains

Domains [InterPro]
DC_0226
STR
1–339
DC_0226
AUS00797.1
1 340
Architecture
STR
STR 1-339 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS00797.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 122 122 0,9695
Central domain 123 321 200 0,2391
C-terminal 322 340 18 0,9946
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-122
Central
123-321
C-terminal
322-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.278.O._10N.286.54.E8
[NCBI] 		1881278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS00797.1 [NCBI]
Genbank nucleotide accession
MG592647.1 [NCBI]
CDS location
range 36790 -> 37812
strand +
CDS
ATGTCAATTAGAAAAGATGTAGACTACCCAGGGCGATGGGATGCAGCAACAACGGAATACCCAATGGGTAAGCCAAAAAATAGAACAACATCAACATCAAAGGACGGCTCATATCTTGAAAAGAAATGGATCGGAGATTATGAGGCATTGCTTGGCGCGGCGCTTGGTGAAACCGGAGAAACCCCAAACGGCGTTCAAGATACAGCTTTAGATAGTCAAATCTACAAGGCTATGCAAAAAGGGCGTCAGGTTTTGCCGTTCAACTTGGATTGGAACGGCTTTATGGACCCGTCGCACCAATCTAGCCTACCATCGCCATCTGGATACCCTGGCAATAGCTCTGGTGGGGAAGCTGTTTATAGCTCTGGTGATGAAATTACCTTGGGTGTTTTCTCTGGATCGGATCTTAACTCAGTATCTAGTGACGATGACGGATGGATTTTTAGCGGGTCTATTTATAAAGAATATTCACTCACTACCGAACAAGTATCATCAATAGATGTCGATTCCATTAATGTATACATTCGAGGTCAAGACGGTTCGAAGCACTTTGCATCCAATCAAACTAGCGGTGTTACGGTGACAAAACCGTCAACCTCAACGATAAGAGTTGAAATTGACAGTTCTATATTTTCATCTCTTGGGATTACAAAGCTATGGCGCTTTTTTGTTAGCGAAAGATTAGGCCAAGTTGTCGAGCTTTCACCTTCAAAATCAGAAGCAGCAATTAGAGGTGGTAGGGTTAGAGTTTCTAACTCTGATTTTACTATGTACATTTACCCAGATGGATCTTTTTACGCATCGGGCATTATAGGGACTGGTACGACAACGCCATTTTCAGCGTCTATACCAATCCCAATTAACATTAATGAAAGCGTAGTAACATGTACACCTAGATCTAGCGTCCCAGCAGGTAACGGTGTCACAGCAAGCCTAGACAACAGCAACACGCTAACGATATACAAAGAGAATACATCTCTGAGTTTGTCAATTTACACAACCATTAGTGGTAATATCCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9fcc1a136bb82e18c760c1e497f3c4a944797e7792f75649424c96c1ec2ade0e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank