Protein

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Genbank accession
AAP74528.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAIRTYDILLDSYNSTIPEPIVGRQGDKNGAVTLHVTITDRGTAVDLTGKTVNLMAETANGTAVVADNAGVTLTDTVNGKFDYAIPNALWSESGKITKAYFSLNDNDGQQTTYDLIFIVKKAIDVSQKTADDYITIIDGTLRDLKTKIDAIYAEYQNGTFYSRNEIDEIIGNLNNVFYTQDEIKNIDNKTRDDAAGYATMHRLGRKYHTPGTTGSVAQGFAGLGGTKVVQYYQNVIPLDVTKGTLTKFDVETGVEYLSNEIQGYHGNSMTYNSKDGFLYLAPAEDTSSGRVELKSIIKIDPETLTINKTIDLSGITGLPEVHAVGYDNIDDCFVISDNKTMEFYDSSWNLKFTIKWSDLIGYDPQYMQGVQVNGTSLYWIGGRKSQIWHYDIDFKNQKLTYRTTYIFDKFQEGLYPTGELEGLAFNDNGKIYVSSENSIGGWGGLTQFYETNSSFKIPISGSTVVSIQNNDPNTIDFYVGKNDNYNPDGTISNPFSSMVEACVCIGNPSTAVKQLTLLNNMDGSLTFIGVDNIMVKTQGSSVNAAVFINCNNIYVDYLYTSGSSGWNNNALYILHSNVRINGWTCADLAGNTSITEDAHIERSDVFLQDNSNSRIGLYNSTMRSTGNSNGVVKQNIMSKLIGNKITGTITNVTSSNALITSDFYYYTNIKAKVDVTISGNTFTFNLAGQVKTGIIDLVGYARSFGVIYMCVFHFSTDAQQNSTLEVYNVPGFTKQTLSSYSINVSVTDN
Physico‐chemical
properties
protein length:749 AA
molecular weight: 82449,83150 Da
isoelectric point:4,80690
aromaticity:0,10681
hydropathy:-0,26529

Domains

Domains [InterPro]
DC_1249
STR
2–345
DC_1249
G3DSA:2.60.40.3350
ATT
3–125
G3DSA:2.60.40.3350 IPR011044
IPR018913
ATT
14–144
IPR018913
AAP74528.1
1 749
Architecture
ATT
STR
ATT
ATT 2-144 | STR 145-240 | ATT 241-443 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAP74528.1
1 749
Domain Start End Length (AA) Confidence
N-terminal 1 195 195 0,9941
Central domain 196 662 468 0,8787
C-terminal 663 749 86 0,8171
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-195
Central
196-662
C-terminal
663-749

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiJL-1
[NCBI] 		2892345 Uroviricota > Caudoviricetes > Coetzeevirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAP74528.1 [NCBI]
Genbank nucleotide accession
AY236756 [NCBI]
CDS location
range 22077 -> 24326
strand +
CDS
ATGGCAATTAGAACTTATGACATCTTACTTGATAGTTATAACTCGACAATTCCCGAGCCTATCGTAGGGCGTCAAGGAGATAAAAACGGCGCTGTTACGTTGCATGTAACGATTACAGACCGTGGGACTGCGGTTGACTTGACAGGAAAAACAGTTAATCTGATGGCCGAAACAGCCAATGGAACGGCTGTCGTAGCTGACAACGCTGGAGTAACGTTAACCGATACAGTAAACGGAAAATTTGATTATGCTATTCCTAATGCACTGTGGTCTGAATCAGGAAAAATCACAAAGGCTTACTTCTCGCTTAATGATAACGATGGGCAGCAAACAACTTATGATTTAATTTTTATCGTTAAAAAAGCAATCGACGTTTCCCAGAAAACAGCCGATGATTATATTACTATCATTGATGGTACACTAAGAGATTTAAAAACTAAAATTGATGCAATCTATGCTGAATACCAAAACGGAACGTTTTATAGCCGTAATGAAATTGATGAAATTATTGGCAATCTTAACAATGTCTTTTACACTCAAGATGAAATAAAAAACATTGATAACAAAACCCGTGATGATGCAGCTGGATATGCAACTATGCACAGACTTGGAAGAAAGTATCATACTCCAGGAACAACTGGTTCAGTTGCTCAGGGATTCGCAGGATTAGGTGGAACTAAAGTTGTCCAGTATTATCAAAATGTCATTCCGTTAGATGTTACAAAAGGGACACTAACAAAGTTTGATGTAGAAACCGGCGTCGAATATTTATCAAACGAGATTCAAGGCTACCATGGTAATAGTATGACGTACAACTCTAAAGATGGATTCCTATATTTAGCACCAGCCGAAGATACTTCAAGTGGCCGAGTTGAGCTAAAAAGCATTATTAAAATAGACCCGGAAACACTTACTATAAACAAAACTATCGACCTATCTGGAATTACTGGCCTTCCAGAAGTACATGCCGTGGGCTATGACAACATTGATGATTGTTTTGTCATTAGTGATAATAAAACGATGGAATTTTATGATTCTTCATGGAATTTAAAGTTCACAATTAAATGGTCAGATTTGATCGGATATGATCCACAGTATATGCAAGGCGTTCAAGTAAATGGCACGAGCTTGTATTGGATTGGTGGGCGAAAATCTCAAATATGGCATTATGATATTGATTTCAAAAATCAAAAACTAACTTACAGAACGACCTATATATTTGACAAATTTCAAGAAGGTTTATACCCAACTGGCGAACTAGAAGGGCTTGCATTTAACGATAATGGTAAAATATATGTATCTTCTGAAAACAGTATCGGTGGTTGGGGTGGACTGACGCAGTTCTATGAAACAAATAGCTCTTTTAAAATTCCTATATCAGGATCAACTGTTGTTTCTATCCAAAATAATGATCCAAATACTATCGACTTTTATGTTGGGAAAAATGATAATTATAACCCAGATGGTACTATCAGCAACCCATTTTCTAGTATGGTAGAAGCGTGCGTTTGTATAGGAAATCCATCAACTGCAGTAAAACAGCTAACCTTGCTGAATAACATGGATGGATCGTTAACATTTATAGGCGTTGATAATATTATGGTTAAGACACAAGGGTCCTCTGTGAATGCAGCCGTTTTTATTAACTGTAACAATATTTATGTTGACTATTTATACACATCCGGTTCTTCGGGATGGAATAATAATGCGCTTTACATTTTACATTCTAACGTTAGAATTAACGGCTGGACATGTGCTGACTTAGCTGGCAATACGAGTATTACAGAAGATGCTCATATAGAACGTTCTGATGTATTTTTGCAGGATAACTCAAATTCGAGGATAGGACTATATAACTCAACAATGCGTTCTACTGGAAATTCAAATGGCGTAGTCAAGCAAAATATAATGTCTAAACTGATTGGCAATAAAATTACCGGGACTATTACGAACGTTACGAGTTCGAACGCATTAATTACAAGCGATTTTTATTATTACACTAACATAAAAGCAAAAGTTGATGTTACGATATCAGGTAATACATTTACCTTCAATCTAGCAGGACAAGTAAAAACTGGGATAATTGACTTAGTAGGATATGCGAGATCTTTTGGTGTTATTTATATGTGTGTATTTCACTTTTCAACCGATGCTCAGCAAAATTCAACGTTAGAAGTATACAACGTCCCCGGATTTACTAAACAAACGCTTAGCAGTTATTCAATAAACGTTTCGGTTACTGACAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d3ddafd5b5ae31082a82cb407fe8be389850a35cf20c32cf679c3d5ddaff97b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a Lactobacillus plantarum bacteriophage, phiJL-1, from a cucumber fermentation Lu,Z., Breidt,F. Jr., Fleming,H.P., Altermann,E. and Klaenhammer,T.R. 2003 12781945 GenBank
Sequence analysis of the Lactobacillus plantarum bacteriophage PhiJL-1 Lu,Z., Altermann,E., Breidt,F., Predki,P., Fleming,H.P. and Klaenhammer,T.R. 2005 15777728 GenBank