Protein

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Genbank accession
UGO51839.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MIKLKGILRDASENPIPDVRIILRSVKNGDVPTGVETVIISGKDGSYETEISTGSYICYLMIDDKETAMPGYVNIYKYSGTGTLQEYLYAPCEIDARPMFLYMIDLALQQMRILVESKEEIRGYYIRAEDAASRAEAAIAASGKIYTSIEQGIAGTSSGDSFIVSFSEQNDEYKDIALGVYNNKDGSAEFVTSIYSKVVIDRIISMISKRNGNELSSGISSDGKPYFVFAPNGGLMLRGINGFIQDIDTVKNPEKYKKLAGVVDIVDESTLSENIDSEGKGYSLFAPNGGLMLRGLASSVQESIKTIANRVNAIDGGVTPPKSVENKVIPIYAIDDNGGMYSASVTFSAAVDNVTEPSHMSSWPQGKMRKNSKGVIYQGYNNTTSHGGSGMIPRIKYSEDNGKTWSDGYTVDVIPGKARGTDHWAIGVDGSDNLYSIVRARGATNKLGDTDHRLYKSTDSGKSWSYVKSLNYVTQKIGADDFVPELYHDMLYFDGYFYTGYHFANSSRLGVLKFNPLSPDTDYQEYEFIAHGEMSTTTLVEINIDYDPFARKFYGGIRTQSDSVPARLFYVNTDMSSLKMFDAPYSVKFNVMAVKRCGDYVYYTTIERFNTGEMKVFATYKNNYYSGDNTKFFSFNIGKIISKKPSGASNVGVQSMVEVNGDLLLSFGTQDNNDNSLVYVAKIGINNNENQITYSDIEV
Physico‐chemical
properties
protein length:699 AA
molecular weight: 77182,65720 Da
isoelectric point:5,13150
aromaticity:0,11016
hydropathy:-0,32589

Domains

Domains [InterPro]
IPR013609
ATT
2–107
IPR013609 DC_1164 G3DSA:2.120.10.10
G3DSA:2.120.10.10
STR
360–695
G3DSA:2.120.10.10
IPR036278
STR
373–471
IPR036278
cd15482
ENZ
395–484
cd15482
UGO51839.1
1 699
Architecture
ATT
ATT
STR
ATT 2-107 | ATT 123-218 | STR 347-695 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGO51839.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 325 325 0,9862
Central domain 326 536 212 0,8356
C-terminal 537 699 162 0,3723
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-325
Central
326-536
C-terminal
537-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS_Carrot
[NCBI] 		2902687 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO51839.1 [NCBI]
Genbank nucleotide accession
OL539439.1 [NCBI]
CDS location
range 18751 -> 20850
strand +
CDS
ATGATTAAGCTCAAAGGCATTTTGAGGGACGCAAGCGAAAATCCTATTCCTGATGTAAGGATTATCCTGCGCTCAGTTAAAAATGGCGATGTTCCAACTGGAGTTGAAACGGTCATTATATCTGGCAAGGACGGCTCTTACGAAACAGAGATTTCAACTGGTAGCTACATTTGCTATCTGATGATTGACGACAAAGAGACCGCCATGCCTGGGTATGTAAATATTTATAAATACTCGGGAACCGGCACGCTTCAAGAATACCTGTACGCACCATGCGAGATTGATGCCCGCCCGATGTTTCTGTATATGATTGATTTAGCATTGCAGCAAATGCGAATCCTGGTTGAGTCAAAGGAAGAGATTCGCGGCTATTATATTCGAGCTGAAGACGCTGCATCCAGGGCGGAAGCGGCAATTGCTGCAAGCGGAAAAATCTACACGTCGATAGAGCAGGGCATCGCTGGAACCAGTAGCGGTGATTCTTTTATTGTTTCATTCAGCGAACAGAATGATGAATACAAAGATATCGCCCTTGGTGTTTACAACAACAAAGATGGAAGCGCGGAGTTTGTTACGTCAATTTACTCTAAGGTTGTCATTGACCGTATTATTTCAATGATTTCCAAGAGAAACGGCAACGAGCTTTCATCCGGCATTAGCTCGGACGGCAAGCCATATTTCGTGTTCGCACCAAACGGCGGTCTTATGCTGCGCGGAATTAATGGGTTTATTCAGGATATAGATACTGTAAAAAATCCAGAAAAATATAAAAAGCTTGCTGGAGTTGTTGACATAGTTGACGAATCAACACTTTCTGAAAATATAGACTCAGAAGGAAAAGGCTATTCACTGTTCGCACCAAACGGCGGTCTTATGCTGCGCGGCCTGGCTTCATCGGTTCAGGAATCAATCAAAACAATCGCAAACAGGGTTAACGCTATTGATGGCGGGGTAACACCACCAAAGTCAGTCGAAAATAAAGTAATACCGATTTACGCGATTGACGACAACGGCGGCATGTACTCCGCTAGCGTTACGTTTAGCGCAGCAGTAGACAACGTAACAGAGCCTAGTCACATGTCATCATGGCCGCAGGGCAAAATGCGAAAAAATTCAAAAGGTGTTATTTATCAGGGTTACAACAACACCACTTCGCACGGCGGAAGCGGCATGATTCCAAGAATCAAATATTCTGAAGACAATGGAAAAACATGGTCTGACGGTTACACTGTTGACGTAATACCAGGAAAGGCCAGGGGAACTGACCACTGGGCAATTGGTGTTGATGGCTCTGATAATTTATACTCAATTGTTAGAGCTAGGGGCGCAACAAATAAACTCGGGGATACAGACCATAGGCTATACAAATCAACTGACAGCGGGAAAAGCTGGAGTTACGTAAAAAGCCTCAACTATGTAACACAAAAAATCGGAGCAGATGATTTCGTTCCTGAGCTTTACCATGATATGCTGTATTTTGATGGCTATTTCTATACTGGATATCATTTTGCAAATTCGTCTCGCCTTGGCGTTCTTAAATTCAACCCACTTTCACCTGATACGGACTATCAGGAGTATGAATTTATCGCTCATGGAGAAATGAGCACCACCACGCTAGTAGAGATTAATATCGATTATGACCCTTTCGCCAGAAAGTTTTACGGCGGGATTAGAACGCAAAGCGACTCTGTTCCAGCCAGGCTTTTTTATGTGAACACTGATATGTCCAGTCTGAAGATGTTTGATGCGCCGTATTCTGTTAAGTTTAACGTTATGGCCGTAAAGCGTTGCGGGGACTATGTGTATTACACAACAATAGAGCGATTCAACACTGGCGAGATGAAGGTATTCGCCACCTACAAAAACAACTATTATTCTGGAGATAATACCAAATTCTTCTCGTTCAACATCGGGAAGATTATCAGCAAAAAACCTAGCGGAGCGTCTAACGTTGGCGTTCAATCAATGGTTGAAGTTAATGGCGACTTGCTGCTATCATTTGGCACGCAAGACAACAATGACAATTCATTAGTTTATGTTGCTAAAATCGGCATAAACAACAATGAAAATCAAATCACTTACAGCGATATAGAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d9cce2dd8363f12e0a8867488038d88ba5df6d9362015296210d96670114979
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50