Protein

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Genbank accession
APM00258.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGHLDIHPDSITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMVGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGGSDFSGVLVPNDTFSLVSAWTNTDVDLSGGGYQVLSVSEGTVTFIVPGGLIGRWQEIRPGSFFRGDGEASLQPDNTYEKTLTDWVSINRTEVERIVANIAAANGMYKDNGKSKTLAYVTAEIQYQLLDENSVPYGPIYTAQGTVSGRTPDYNGVTIYADLPVASRVRVRARRVTDLDFNFEGSVVDEVTYVNLYGQTRDNTPHYGNRTTVHSMRKQTPRAAEVKQPQLRMIATEMVYKYLGNGVFEDTRTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQKEIEDYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDAQVFDSLKFSYIDPKTNVKETITIPETGGVKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFTATEEGIFALPNRAVSVVKGSRMAAYDGYITAVNGLTVELSQPVKFTSGDDHSLVLKLRDGGVQSVNVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVPPFGRAFSSGFDNGFN
Physico‐chemical
properties
protein length:852 AA
molecular weight: 93886,81250 Da
isoelectric point:5,31072
aromaticity:0,09742
hydropathy:-0,37453

Domains

Domains [InterPro]
DC_0118
STR
1–686
DC_0118 DC_0808
NF040662
Unmapped
352–832
NF040662
APM00258.1
1 852
Architecture
STR
RBD
STR 1-686 | RBD 703-846 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APM00258.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,9687
Central domain 232 430 200 0,6443
C-terminal 431 852 421 0,1507
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-430
C-terminal
431-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STP03
[NCBI] 		1914788 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus STP03
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
746e965940927ec46daf5f426d48522bcf54c1348203e56e5fdfe06c907c04b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8168
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50