Protein

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Genbank accession
YP_009831566.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MVAKSFRATSGLDAAGEKVINVGKASRSVLSDGVNVDFFNEFNTIQQYDSTRGYAAFMAIMYARRIWYARADIPSPAGAFDETKWISTRNDPKWVYNNVTSTDGLPVESGTYLLADGRFSELTYILPDSPVEGDIITIKDGGGLAGLNNLLVRSNTRQIRLRDIQSSSYRLTHPYMTVAFIFNGNLWRVSEMRDNRDSQFVNATGAGSFQLQAGMVTFRNSGTGKITLQLPRYANDGDSITTYDLDRLASVNVATLQVYPGSGHTISYDGINNVTSVTSQRSGYGIFMFDQANSRWVVYDGDQRVRLRRISDDLNMLPNDYVFITPIAGSPPTVRNVTLTLPQDVAEGDRVYISMYMMGKTQNCTIKVKDDSGEKIRTNKNMMQFPQRKDYPPDDWFSVDTLTFNADTDYLPYIELSYLKATKEWVVAQYRPIIERVDPTNRSRLGVIALATQAEVNKNWEDTPSDELAVTPRTLANKTATETRRGIARLATTAEVNQNTTATFLDDVIVTPKKFNERTATEDRRGVLEIATQTETNAGTDDTTAITPKKLDTRRATETLAGIGKLVTTGATTAEGALRGDAGTNVYNFNNGVDLLTPKSLNEKTATEKSKGLVVLATENEVVTGAAAGSASMPIVVTPEMLHRKTSTESRIGLIEIATQTETNTGTDDLRAVTPKKLNDRKATESLDGIIALATTAEVAAGTVTNKAVVPVKLKEFFDVTGHVAVAAADGLTQSGTIWTTVNLGIVSATETQRGTLRVATQGETDAGTRDDVIITAKKLQAKKATDTAEGIIRCATNAEAGAGTATNLAITPATMQFLNGTDPAWGATTTRRGAVFITTKSNTFIGDNLVGSTQAVDSYLEDFYAVSPRGLNFALQNFLPKMATAQNSLSLGGVVAASWMRRDADQTVTGNNTFNGTSNFVGNVTTNGTLTANAAVAVNAVMTSNNNINQSAKANTVYANTVLSTAAAGTKNLLRTFRGGSTDTTWHETVQGSMYRLATGATDLVDVLTIGDTSNGAMAYYGTNIRLNGKALANINTAGDLFVASDATPTVQLRTAATNGWNGVTISNDNGVTTATVINTRNFTQHLDSTYVNVAGDTMTGTLAVNVSGTGGRFTSVNGTGHIQAGDFSGATQKMRLTGINDQVLTEFNINITDYNKAMINGNLIYHAGRRPTPAEIGAVALAGSTVDTLVVRDYIKIGNVKIFANPVTKTCEFVWEE
Physico‐chemical
properties
protein length:1219 AA
molecular weight: 131211,24650 Da
isoelectric point:5,80857
aromaticity:0,07137
hydropathy:-0,24922

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009831566.1
1 1219
Domain Start End Length (AA) Confidence
N-terminal 1 353 353 0,7102
Central domain 354 708 356 0,1026
C-terminal 709 1219 510 0,6269
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-353
Central
354-708
C-terminal
709-1219

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_leE
[NCBI] 		1873954 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus lee
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831566.1 [NCBI]
Genbank nucleotide accession
NC_048646 [NCBI]
CDS location
range 167228 -> 170887
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCCACAAGTGGCCTTGATGCTGCTGGCGAAAAAGTTATCAACGTTGGTAAAGCATCCCGCTCTGTGTTGAGCGACGGCGTGAACGTTGACTTTTTTAACGAATTTAACACGATCCAACAATACGATTCTACCCGTGGCTATGCTGCGTTTATGGCTATCATGTACGCGCGTCGTATTTGGTACGCTCGCGCAGATATTCCATCACCAGCGGGTGCTTTCGATGAAACAAAATGGATCTCAACCCGTAACGATCCAAAATGGGTATATAACAACGTAACGAGCACTGACGGTCTCCCTGTTGAATCCGGTACGTACTTACTGGCTGATGGTCGTTTCTCTGAACTGACATATATTCTACCAGATTCCCCTGTTGAGGGTGATATTATCACCATTAAAGACGGTGGCGGTCTTGCAGGTCTCAACAACCTTTTGGTTCGTTCAAACACCCGACAGATCCGTTTGCGTGATATTCAGTCAAGCTCTTATCGACTGACTCACCCATACATGACCGTAGCGTTTATCTTTAACGGTAACTTATGGCGTGTTTCTGAAATGCGCGATAACCGCGATTCGCAGTTTGTGAACGCAACAGGTGCGGGTTCTTTCCAACTGCAAGCGGGTATGGTAACATTCCGTAATAGCGGTACAGGCAAGATTACTCTGCAATTGCCTAGATACGCAAACGATGGTGACTCAATCACAACTTACGATCTGGATCGCCTTGCTTCGGTGAACGTTGCGACTCTGCAAGTTTATCCTGGTAGCGGACACACGATCAGCTATGACGGTATCAACAACGTAACTTCTGTGACTTCACAGCGTTCCGGTTATGGTATCTTCATGTTCGATCAGGCTAATAGCCGCTGGGTCGTTTATGATGGTGATCAGCGCGTTCGTCTGCGTCGTATCAGTGATGACCTGAACATGTTGCCGAACGATTACGTGTTTATCACCCCGATCGCTGGTAGTCCTCCAACTGTGCGTAACGTAACGCTGACTCTTCCGCAAGATGTTGCCGAAGGTGATCGCGTGTATATCAGTATGTATATGATGGGGAAAACGCAGAACTGCACAATCAAAGTTAAAGATGATTCCGGTGAAAAGATCCGCACCAACAAAAACATGATGCAGTTCCCACAGCGTAAGGATTATCCACCTGATGACTGGTTCAGTGTTGACACTCTGACTTTCAACGCCGATACTGACTATCTTCCATATATAGAATTGTCGTATCTGAAAGCTACGAAAGAATGGGTAGTTGCACAATATCGCCCGATCATTGAACGTGTTGATCCAACAAACCGTTCTCGTCTGGGTGTGATCGCGCTGGCTACACAGGCAGAAGTAAACAAAAACTGGGAAGATACACCGTCTGATGAACTGGCAGTAACCCCGCGCACACTGGCGAATAAAACCGCTACTGAAACGCGTCGTGGTATTGCTCGACTGGCTACCACTGCGGAAGTGAACCAGAACACAACGGCTACTTTTTTGGATGACGTAATCGTAACACCTAAAAAGTTTAACGAACGTACAGCAACAGAAGATCGCCGTGGTGTGTTGGAAATCGCTACCCAGACTGAAACGAATGCTGGTACTGATGACACTACCGCAATCACGCCTAAGAAGCTCGACACGCGCCGCGCGACCGAAACCCTAGCAGGTATCGGGAAACTCGTTACAACGGGCGCTACGACAGCGGAGGGGGCTTTACGTGGGGATGCTGGTACTAACGTCTACAACTTCAATAACGGTGTTGACTTACTGACTCCGAAATCATTGAACGAGAAGACGGCGACCGAAAAGTCAAAAGGTCTGGTTGTTCTGGCGACCGAAAACGAAGTGGTAACTGGTGCTGCTGCTGGATCTGCTTCAATGCCGATCGTAGTAACTCCTGAAATGCTCCATCGTAAAACGTCTACTGAATCACGAATCGGTTTGATTGAAATCGCTACCCAGACAGAAACGAATACTGGAACCGATGATCTCCGTGCGGTAACGCCTAAGAAACTGAACGATCGCAAGGCTACTGAATCGCTTGATGGTATTATTGCCCTCGCTACTACTGCGGAAGTTGCAGCAGGTACAGTGACGAACAAGGCAGTTGTTCCGGTTAAGCTGAAAGAGTTCTTCGACGTTACGGGTCATGTTGCTGTTGCTGCTGCGGACGGGTTAACCCAATCCGGTACTATCTGGACAACGGTTAATTTGGGGATTGTTTCTGCTACCGAAACGCAACGTGGTACTTTACGCGTAGCGACTCAGGGCGAAACTGATGCGGGTACGCGTGATGATGTGATTATCACTGCGAAGAAACTGCAAGCGAAAAAGGCAACTGATACAGCAGAAGGTATCATTCGTTGTGCGACTAATGCGGAAGCTGGCGCGGGTACTGCTACTAACCTGGCAATTACTCCGGCTACAATGCAGTTCCTTAACGGTACTGATCCGGCATGGGGCGCAACCACTACCCGACGCGGTGCGGTGTTTATCACAACCAAATCAAACACCTTTATCGGTGATAACCTGGTTGGTTCTACTCAGGCAGTAGATAGCTATCTGGAAGATTTCTACGCTGTATCGCCTCGCGGTCTGAACTTTGCTCTGCAAAACTTCTTACCGAAAATGGCAACAGCACAGAATAGCTTGAGTCTGGGTGGTGTGGTTGCTGCAAGCTGGATGCGTCGTGATGCTGATCAGACCGTGACTGGTAACAACACCTTTAACGGTACGAGCAACTTCGTAGGCAACGTAACCACTAACGGCACACTGACGGCGAACGCTGCTGTTGCAGTTAATGCGGTGATGACCTCAAACAATAACATCAACCAGTCTGCGAAAGCAAACACGGTTTATGCCAATACTGTTTTGAGCACTGCTGCTGCTGGAACCAAAAACCTGCTTCGTACTTTCCGTGGTGGTTCAACGGATACTACCTGGCATGAAACGGTTCAGGGAAGCATGTACCGCCTTGCAACGGGCGCAACGGATCTGGTCGATGTTCTGACTATCGGTGATACTTCTAACGGCGCTATGGCGTACTACGGTACGAATATCCGCCTGAACGGTAAAGCCCTGGCAAACATCAATACCGCTGGCGATCTGTTTGTTGCAAGTGATGCAACTCCTACGGTACAATTACGAACCGCTGCAACTAACGGTTGGAACGGTGTGACAATCAGTAATGATAACGGCGTGACTACTGCGACCGTGATCAACACCCGAAACTTTACCCAGCATCTTGACAGTACCTATGTCAACGTGGCGGGTGATACGATGACGGGAACCCTTGCGGTTAACGTTAGCGGTACGGGTGGACGCTTTACCAGTGTAAACGGTACTGGTCATATTCAGGCGGGTGATTTCTCTGGGGCAACTCAGAAAATGCGCTTAACTGGTATCAATGATCAGGTGTTGACTGAATTCAACATCAACATCACCGATTACAACAAAGCGATGATCAACGGAAACCTGATTTATCATGCGGGTCGTCGTCCGACTCCTGCGGAAATCGGTGCTGTTGCGCTGGCGGGTTCAACCGTTGATACTCTGGTTGTTCGTGACTACATCAAAATCGGTAACGTGAAAATCTTCGCAAATCCAGTCACTAAGACTTGTGAATTTGTGTGGGAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfde5566d6c92c53eb9c09483cbd0174093937559e3881a574eeb1c4064166c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5723
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50