Protein

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Genbank accession
YP_009152556.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDSNGEFTMDLESSTSAYRVTALGDEDEFEDDPYSQYTFTFYVPDSVDPVYVQELILMPPPNNLPWDEEAMNKITQAVVDARNARDDAEESADRAEAQVGLAAEQVTLAKAEVTKATAQADRSKAEADRATTQATNAANSATAAANSATQANTQANRAKTEADRSKSEADRAWDLADAMAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGSVMRLTKTDGSGSRAFVRQAVTFPDSHWIVYMRLKTQTGTASQNRSAQIRFIAADNKDCVVYFNVNANGLVEPNTIHMQGTEGGTRNAATMFTGLGTEDWLDLAVKYDAVNRHIELFRRMPNGIWQKGGGRLMVDAIKPAFIEVSSMPVAPQNWWLDLDYISVCKPNLICYGDSIAAGQNEYGVTRGNNPYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFMHASTNDVNDASMTMEKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASSNTVKLRDYTDQWWNTELPKVNGLAQTLDIARLIAKDGYMDPDLAASDGLHLTNASAQKIADKLGQFFSNSSDTNGFAPLDSPAFTGTPTVPTQTPFLPYGKAIANTEYVVTFIQAWTQRYGYGELTMDSRTGAQLSGSGVRSGYYHVPAGAGNPLPSGLNTTLAFVDHKSYDTNKGWQLWNPAYTGRLFIRTTNSAGTWQTPVELATFTWLDKNNVTKPRTLKFMELPLFNPAGSPTLSGFVPIQDSADGGWRNLSATPTGVALLGASSAGGALSYLGGMPIANQTLPSNSIDNAALNGFYSVPNGTAGLPPGMEGTNGHAGITSVFDNSTKYQLLFPRTGGASSYATSVFYRARSNNGWESWVRLLASNQLEGSVTSEPLTTAIFQNNGNNNQNVGRSVRFADGTQIVYATIRLTYSAVDVLQYTYTYPMGFVAPPTITVQPILGARADINNMPYFAVTSPFTYNVNNRNALVQIYRVAGYTAHSFASTSFINCALIAVGRWK
Physico‐chemical
properties
protein length:1069 AA
molecular weight: 116285,05940 Da
isoelectric point:5,22517
aromaticity:0,09822
hydropathy:-0,34079

Domains

Domains [InterPro]
DC_0123
ATT
1–153
DC_0123 Coil Coil IPR051532
DC_0268
ATT
110–361
DC_0268 DC_0711
Coil
Unmapped
118–152
Coil IPR036514
SSF52266
STR
432–630
SSF52266
cd00229
ENZ
435–631
cd00229
IPR013830
ENZ
437–620
IPR013830
YP_009152556.1
1 1069
Architecture
ATT
STR
ATT 1-361 | STR 383-1068 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009152556.1
1 1069
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9905
Central domain 237 481 246 0,5455
C-terminal 482 1069 587 0,6812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-481
C-terminal
482-1069

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YH6
[NCBI] 		1566995 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009152556.1 [NCBI]
Genbank nucleotide accession
NC_027388 [NCBI]
CDS location
range 32180 -> 35389
strand -
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGTAGCCCACAGGCGAACGAGAAGTTCACTGTGCGGCTCACCCGTCCTGGTATGAGCGATGCAGAGCACTGTGTCGTTATTCCCGAAACCTACGAGATGGTGACTGACTCCAATGGTGAGTTCACCATGGACTTGGAATCGTCTACCTCTGCCTACCGCGTCACCGCACTCGGTGATGAGGATGAGTTCGAGGACGATCCCTACTCGCAGTACACCTTCACCTTCTACGTGCCGGACTCTGTTGATCCGGTCTACGTGCAGGAACTGATCCTGATGCCTCCGCCCAACAATCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAAGCGGTGGTTGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCTGCTGAGCAAGTGACCCTTGCAAAGGCAGAGGTGACCAAGGCTACCGCCCAGGCCGATCGCTCTAAGGCGGAAGCTGACCGTGCCACTACCCAGGCTACGAACGCAGCCAATTCGGCTACTGCTGCGGCCAACTCTGCCACCCAAGCCAACACGCAAGCAAACCGTGCGAAGACGGAAGCTGACCGCTCCAAGAGTGAGGCTGACCGTGCATGGGATCTGGCTGACGCCATGGCTGAGAAGGTCGAGGGCGGCTCTTTACCTCCGCTGGTAGGCATGAACGAAACCTTCACCTACGAAGGTACCGACCCTTACCGCTGGACCGTCTCTGGTCCTGCTACGGCTGTCTCGGACGGTAGCGTCATGCGCCTGACCAAGACCGATGGCAGCGGTTCCCGTGCGTTCGTACGGCAGGCAGTGACCTTCCCGGACAGCCACTGGATCGTCTACATGCGGTTGAAGACCCAGACCGGTACCGCCTCGCAGAACCGTTCTGCACAGATCCGCTTCATCGCTGCTGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTTGGTGGAACCCAACACCATCCACATGCAAGGCACCGAGGGTGGTACCCGCAACGCTGCCACCATGTTTACTGGTTTGGGTACCGAGGACTGGCTAGACCTCGCTGTGAAGTACGACGCAGTGAACCGCCACATTGAACTCTTCCGTCGCATGCCCAATGGCATCTGGCAGAAGGGTGGTGGTCGTCTGATGGTTGACGCTATCAAGCCGGCCTTCATCGAAGTCTCGTCCATGCCTGTAGCACCACAGAACTGGTGGTTGGATCTGGACTACATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGAGATAGCATCGCTGCTGGTCAGAACGAGTATGGGGTAACCCGTGGGAACAACCCCTACAACAACAACCGCAACTGGGCTGGTACCTGGTTCGGCAAGGTTCCGCTCTACGCCACCAACCGGAACAACCTGGTGCTTGTCCAGGGTGTGGAAGGCCGTCGTACCTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAACTCTGGCGTCAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAACGATGCCTCCATGACCATGGAGAAGCGCACCTCTGATACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCCCAGGTGGTGCTGTTCAACTCCATGCAGGGCACGAAGGCGTACAACGATGCCTCGTCCAACACGGTCAAGCTGCGTGACTACACCGACCAGTGGTGGAACACCGAACTGCCAAAGGTCAATGGTTTGGCCCAGACCCTGGACATCGCACGTCTCATCGCCAAGGACGGGTACATGGACCCTGATCTTGCTGCGAGTGATGGGCTGCATCTGACCAATGCTTCGGCACAAAAGATCGCTGACAAGCTCGGTCAGTTCTTCTCCAACTCCAGCGATACCAATGGTTTCGCTCCGTTGGATAGCCCGGCCTTCACTGGTACTCCGACTGTCCCCACACAGACTCCTTTCCTGCCGTACGGCAAGGCTATCGCCAACACCGAGTACGTGGTCACGTTCATCCAAGCCTGGACTCAACGGTACGGCTACGGTGAACTCACCATGGATAGCCGTACCGGTGCTCAGCTGTCTGGTTCGGGTGTACGCAGTGGCTACTACCATGTACCTGCCGGTGCGGGTAACCCTCTGCCCTCTGGCTTGAACACTACCCTGGCTTTCGTGGACCACAAGTCCTACGACACCAACAAGGGCTGGCAGCTGTGGAATCCGGCCTACACTGGCCGTCTGTTCATCCGTACTACCAACTCCGCTGGTACGTGGCAGACCCCGGTAGAACTGGCTACCTTCACCTGGCTGGACAAGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCGCTGTTCAATCCTGCTGGCAGCCCGACTCTATCTGGCTTCGTACCGATTCAGGACAGTGCAGACGGTGGCTGGCGTAACCTGTCTGCCACGCCTACTGGTGTGGCTTTGCTGGGTGCTTCTTCGGCTGGTGGGGCGCTGAGCTACCTTGGTGGTATGCCCATTGCAAACCAGACCCTTCCGAGTAACAGCATCGATAACGCAGCCCTCAACGGCTTCTACTCGGTACCGAATGGAACTGCTGGTCTTCCGCCGGGCATGGAAGGTACGAACGGTCACGCTGGTATCACTTCGGTCTTCGACAACTCCACGAAGTACCAGCTGCTTTTCCCGCGTACTGGTGGTGCTAGTTCCTACGCTACCTCTGTGTTCTACCGTGCTCGGTCGAACAACGGGTGGGAAAGCTGGGTGCGGTTGTTGGCTTCGAACCAACTGGAGGGTTCGGTAACCTCTGAACCTCTGACTACCGCTATCTTCCAGAACAACGGCAACAACAACCAGAACGTAGGTCGTTCTGTACGTTTCGCTGACGGCACTCAGATCGTCTACGCAACGATACGACTCACCTACTCTGCGGTGGATGTGTTGCAGTACACCTACACCTACCCGATGGGGTTCGTAGCACCTCCTACTATCACTGTGCAACCTATACTGGGTGCTCGTGCTGATATCAACAATATGCCTTACTTCGCTGTGACCAGTCCGTTTACCTACAACGTGAACAATAGAAATGCTCTCGTGCAGATCTACCGGGTTGCTGGGTATACTGCACACAGCTTTGCCAGTACTTCATTCATTAACTGCGCACTGATCGCAGTAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcb2e4600b70a035c6493a97e0ad6cc963a786e86dabab733c4780ff03b85d46
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3596
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50