Protein

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Genbank accession
YP_001950049.2 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MKISLTQAGVNLLNSNQGPVTVTSFQVGAGFGYTPSLSDTALHGALLFTGQPTAPVAVNANVVKYSAYLDFNLGPFAFGEVGLFVGNTLFALAAADELIQKLATGSTPGNSVRIDMYLSMVGQNYAMWLNLATSNNEFQMAILPSVDNLPPSSQAVPNAYVVSGNAQSSAFMAYTDQNGFWNFDAYAYFNQASVVITGATATSITIGLGSYLPGFTPSYPGSVLLEFSSGQNYSICRQVTSTVISGSNVTISFSTPLMVLPAAGDSVTFFGRQQLSTTIPNLPIATSTTLGAVIVGTSLTVDATGLINVAPTAYPVSSVNGKTGAVVLTATDISGFATVARTGLYSDLIGAPGAYTLPVATTTTLGGVKVPTTGNLSVDGTGNLSLGFNPVKSVNTNLPDANGNVTINIPTPPPQVVYIGLVQPAAIASGQDFNQMQTTGLFYATDAVASSLINAPITTTGGTLDIEPFSTTASGGDVIQRYTTQDTIYWRRYVQSSNTWTSWVGTITSAGAIPVATSTVLGGIKVGANLTVTGDGTLSATPYSLPTASSTVLGGIKVGSGLSIDGSGVLSASSSLTAPNIMYNGSGEFGATGWTVPANFAFVRDPSYGPLFQNTSALTTASFTLSTPKVTVDPNVSHYASVDLTVGLSAGNVTLNLISYDGSNNPTTVATQTFTAASVFSRQFVGGFLPSNAVTAAVTIVGAGVSANIAGIQVRRVKLEAASSPSAYSVEADVVPATTTALGLVKVGANLAVAADGTLSATAQPLSPATTTTLGGVQIPVASSLSVDGAGNLSFVQNANMLSNSSGGSGTLGWNIPASFSVVNSYGPIFISNTTLSGVSTGIITPKAPALASTTYTLSGDIYNVSTAGTIQLAIVAYDSGGTMIGSGAFASSSNAPNGGWSRISVTGTTPAGTAFLAADVFLSGVSAPVSGVAFRRLKLELGSTPTAYSVEGDILTATTTMTGLVKGGGTNITIAADGTLNVPTGAGYSLPVATASVLGGVKPSTGLAVDGTGVLTLAPGGTTAQWVLGNGTVSNTLSGTATINGTINVGTDSAISMNGASNSILQLKTTSYNRLMYLENGAGNIIFAVSNGSFGATSTLMTISGTGMVSATDFTATSDRNAKTDIQPLVGARALVLGMQGMSFTMKASGKKSVGFIAQDFQPHQYLKDLVHTNEDGTLSLSYGPVSAVLVEAFKEQDEELQMLKLRIKQLEALVDNLVGDSK
Physico‐chemical
properties
protein length:1224 AA
molecular weight: 124149,07140 Da
isoelectric point:4,73534
aromaticity:0,07435
hydropathy:0,27892

Domains

Domains [InterPro]
IPR022225
ATT
5–123
IPR022225 DC_1360 G3DSA:2.60.120.260 IPR030392
DC_0510
STR
85–346
DC_0510 cd19958 DC_1360 IPR030392 Coil
DC_0613
RBD
940–1224
DC_0613
YP_001950049.2
1 1224
Architecture
ATT
STR
STR
RBD
ATT 5-123 | STR 124-346 | STR 388-941 | RBD 942-1224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001950049.2
1 1224
Domain Start End Length (AA) Confidence
N-terminal 1 811 811 0,9015
Central domain 812 1017 207 0,2691
C-terminal 1018 1224 206 0,9507
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-811
Central
812-1017
C-terminal
1018-1224

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage phiRSL1
[NCBI] 		1980924 Uroviricota > Caudoviricetes > Mieseafarmvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001950049.2 [NCBI]
Genbank nucleotide accession
NC_010811 [NCBI]
CDS location
range 104083 -> 107757
strand +
CDS
ATGAAGATTTCTTTGACGCAGGCTGGTGTCAACCTGCTGAATTCCAATCAAGGGCCAGTCACCGTCACCAGCTTCCAAGTGGGTGCGGGCTTCGGCTATACGCCCTCGCTTTCCGACACAGCGCTGCACGGCGCCCTGCTGTTCACGGGACAGCCGACGGCACCAGTCGCCGTCAACGCCAACGTCGTCAAGTATTCTGCCTATCTCGATTTCAATCTGGGGCCGTTCGCCTTCGGTGAAGTCGGTCTGTTCGTCGGCAACACCCTGTTCGCACTGGCAGCAGCTGATGAGCTGATCCAAAAGCTGGCGACCGGCAGCACGCCTGGGAACAGTGTACGCATCGACATGTATCTGTCGATGGTTGGTCAGAATTACGCGATGTGGTTGAATCTGGCCACCTCCAACAACGAGTTCCAGATGGCAATTCTGCCGTCGGTGGACAATCTGCCGCCGTCGTCGCAAGCAGTGCCCAACGCCTATGTGGTGAGCGGCAACGCCCAGAGTTCGGCGTTCATGGCGTACACCGATCAGAACGGCTTCTGGAATTTCGACGCATACGCCTACTTCAATCAGGCGTCGGTTGTGATCACCGGGGCAACGGCCACCAGCATCACGATCGGACTGGGTTCGTATCTGCCGGGCTTCACGCCGTCCTATCCGGGATCGGTGCTGCTGGAATTCAGCAGCGGGCAGAACTACAGCATCTGCCGTCAGGTCACTTCGACTGTGATCTCGGGGTCCAACGTCACGATCAGCTTCAGCACCCCACTCATGGTGTTGCCTGCCGCTGGCGACAGCGTCACGTTCTTCGGTCGCCAGCAACTGAGCACGACCATCCCAAATCTGCCGATCGCAACCAGCACGACTCTGGGCGCGGTGATCGTTGGCACGAGCTTGACGGTGGACGCCACGGGCCTCATCAATGTGGCGCCAACCGCGTATCCTGTCTCGTCGGTGAACGGCAAGACGGGAGCTGTCGTGCTCACGGCGACGGACATCAGCGGGTTTGCAACCGTCGCGCGTACAGGTTTGTACAGCGATCTGATTGGCGCTCCGGGGGCCTACACGTTGCCCGTTGCCACTACGACCACGTTGGGCGGCGTCAAAGTGCCGACCACCGGTAATCTGTCGGTTGATGGAACGGGCAACCTGAGTCTGGGCTTCAATCCGGTCAAGTCGGTGAATACCAATCTGCCTGATGCCAATGGCAACGTGACGATCAACATCCCGACGCCTCCGCCGCAGGTAGTGTACATCGGTCTGGTGCAGCCAGCCGCAATCGCCAGTGGACAGGACTTCAACCAGATGCAGACTACTGGCCTGTTCTACGCGACGGATGCGGTAGCCAGTTCGCTGATCAACGCGCCAATCACTACGACGGGCGGTACGCTGGACATCGAACCGTTCTCGACGACGGCAAGTGGTGGCGATGTGATCCAACGATACACAACGCAAGACACTATCTACTGGCGACGCTATGTCCAGTCGTCCAACACGTGGACGTCGTGGGTTGGTACCATCACCAGCGCAGGAGCCATTCCGGTGGCGACGTCGACTGTTCTGGGTGGAATCAAGGTAGGCGCCAACCTGACGGTGACTGGAGACGGCACGCTGTCTGCTACTCCTTACTCACTGCCAACGGCCAGCAGCACGGTTCTGGGTGGGATCAAGGTGGGCAGCGGTCTGTCGATCGATGGCAGCGGGGTGTTGAGTGCGTCGAGCAGCTTGACGGCTCCCAATATCATGTACAATGGAAGCGGCGAGTTTGGGGCCACTGGCTGGACGGTACCTGCCAACTTCGCGTTCGTACGTGATCCGTCCTACGGTCCACTGTTCCAGAACACGAGTGCGCTGACTACTGCCAGCTTCACGCTCAGCACACCGAAGGTTACGGTAGATCCCAACGTCAGTCATTACGCGTCGGTAGATTTGACGGTGGGCTTGTCCGCGGGTAACGTTACACTGAATCTCATCTCGTACGACGGCAGCAACAATCCGACCACAGTTGCTACGCAGACGTTCACCGCGGCGTCTGTGTTCTCGCGTCAGTTTGTTGGCGGATTCTTGCCGTCAAACGCGGTGACTGCGGCGGTCACCATAGTTGGTGCGGGAGTCAGTGCCAACATCGCGGGCATCCAGGTGCGTCGCGTGAAGCTGGAAGCTGCGTCGTCGCCGAGTGCCTACTCCGTGGAAGCCGATGTGGTTCCCGCAACGACTACGGCCTTGGGTTTGGTGAAGGTGGGCGCCAACTTGGCGGTGGCCGCAGATGGAACGCTGTCGGCCACCGCCCAGCCGTTGAGTCCGGCGACCACCACGACGCTTGGTGGGGTACAGATTCCGGTCGCAAGCAGTCTGTCGGTGGATGGAGCGGGCAATCTGTCGTTCGTGCAGAACGCCAACATGCTGTCCAACAGCAGCGGTGGAAGCGGCACGTTGGGCTGGAACATTCCAGCGTCGTTCTCCGTAGTGAATAGCTACGGCCCGATCTTCATTAGCAACACCACGCTCAGCGGCGTGTCGACGGGTATCATCACCCCGAAAGCGCCTGCGCTGGCAAGCACGACCTACACCCTGTCAGGCGACATCTACAACGTGAGCACGGCTGGCACCATCCAGCTGGCGATCGTTGCCTACGACAGTGGCGGCACGATGATTGGGTCTGGCGCTTTTGCGTCTTCCAGCAACGCGCCGAATGGTGGGTGGAGTCGTATCAGCGTAACAGGAACTACGCCCGCAGGCACTGCATTCTTGGCTGCAGACGTGTTCTTGAGTGGAGTGAGCGCACCTGTGAGCGGGGTTGCATTCCGTCGCCTGAAGCTGGAATTGGGGTCCACGCCTACTGCCTACTCTGTGGAAGGCGACATCCTGACGGCTACGACCACGATGACTGGTCTGGTGAAGGGTGGTGGAACCAACATCACCATCGCGGCTGATGGGACGTTGAACGTGCCGACTGGCGCCGGTTATTCGTTGCCGGTTGCTACCGCTTCAGTGTTGGGTGGCGTTAAGCCTAGCACTGGACTCGCGGTAGACGGCACGGGTGTACTGACCTTGGCGCCGGGTGGCACTACAGCACAGTGGGTACTCGGCAACGGTACGGTCAGCAACACGCTGTCAGGCACTGCCACGATCAACGGTACAATCAACGTAGGTACCGACTCCGCGATCAGCATGAACGGGGCCAGCAACTCGATCTTGCAGTTGAAGACGACTAGCTATAACCGGTTGATGTATCTTGAGAACGGAGCCGGTAACATCATCTTCGCGGTCAGTAATGGCAGCTTTGGTGCTACGTCAACGCTAATGACCATTAGCGGTACCGGTATGGTGTCAGCCACCGATTTCACGGCAACGTCAGATCGTAACGCCAAGACCGACATACAACCTCTGGTTGGTGCACGAGCGCTTGTGCTCGGCATGCAGGGCATGTCGTTCACGATGAAGGCCAGTGGGAAGAAGAGCGTGGGCTTCATCGCGCAGGACTTCCAGCCCCATCAGTATCTGAAGGACTTGGTGCATACGAACGAAGACGGCACGCTGTCGCTGTCTTACGGACCCGTGAGCGCGGTACTGGTCGAAGCGTTCAAGGAGCAAGACGAAGAGCTCCAGATGCTGAAGCTCCGCATCAAGCAGCTGGAAGCGCTGGTCGACAATCTGGTTGGCGATAGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff23f0f3d0a35adc85c849a32346b822eecbf3ac41cabb8350f6cce1e0067e62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6490
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50