Protein

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UniProt accession
D0VXF4 [UniProt]
Protein name
Right handed beta helix domain-containing protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSNSNYMYFVDFEKFGIRSDGTEARATTDGWIAALREAVELGYHTVYVPEGLYLIDAVSTVGSLPEYGGGLMFPSNIEVIFHERALFQVAPNSSTGYACFNLENVENVTLRGGTIIGDRYEHDYVTDGVPDKRKTHEWGHGIHIRGCRNITVENATVMNCTGDNIWVPSKGMMNWEDSTYIPSEGITIRKCILIRGRRNNLATNGCLGMNVDDCDFIEAGGDTIGPAFGIDLEGFAENSIKYDHPYEINITNCRFKRNGKGALTSTLQGKFMLLITSPMMAQLWFSTDSTISNNTITNETGVDKPYGIDSIRKSSSETGNRTIITGNQIRGFATGICARGVGVIVSQNYLEDISSVGINPYLSEDVMVANNTINSDCLHVWVRNSVDVKVGNNKGKGAENYYGIKVEDSSDVVVNDNKHVAKGGIQVARSTNVRIKDNDLTLIGNGNGISWDKISQVKLVKSNWISCAVAAAISGYADAYSTIISYNILEDCKYLIAIYLNGGAHHMLKGNDIMFRRGANGGYGVQLVNTTQARLISNDVRTMDGCTLHASYDSTGSTYTKYAYNTYIGKINLGQADTENYNTKLD
Physico‐chemical
properties
protein length:586 AA
molecular weight: 64240,34520 Da
isoelectric point:5,54370
aromaticity:0,08874
hydropathy:-0,26143

Domains

Domains [InterPro]
IPR012334
STR
8–354
IPR012334 DC_0453
IPR011050
STR
33–374
IPR011050 IPR011050
IPR006626
Unmapped
105–146
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR039448 IPR006626 IPR006626
IPR039448
ENZ
138–263
IPR039448 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR012334
STR
394–583
IPR012334
D0VXF4
1 586
Architecture
STR
STR 8-584 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
D0VXF4
1 586
Domain Start End Length (AA) Confidence
N-terminal 1 23 23 0,9523
Central domain 24 575 553 0,9972
C-terminal 576 586 10 0,2614
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-23
Central
24-575
C-terminal
576-586

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage phiNIT1
[NCBI] 		207656 Uroviricota > Caudoviricetes > Herelleviridae > Nitunavirus > Nitunavirus NIT1
Host Bacillus subtilis subsp. natto
[NCBI] 		86029 Bacteria > Firmicutes > Bacilli > Bacillales > Bacillaceae > Bacillus

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
25119ef6e4775899159519fb5eee1e8358369999e17edc9d57e167baba4fe05e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8231
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50