Protein

View in Explore
Genbank accession
QFP93355.1 [GenBank]
Protein name
putative tail fiber 1
RBP type
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAKYRATGQTTLFNVNDAVADTKPPTNPKEGALWYNTTDNKFYIYTNGEWKFAAEGMILGGTNKVINSTFKKDTTSWRNVSTLYKVVAAESDKPNSKILQVTRTGQGSVSIASAYSNVYSVKTGDTITITMDVRVTDTTAYDVTAPFIVEFYDSTGKRVQFRDIYFKDCKVTTIESNKWYRLVYTITATTADIVSGSTRLALFQNGQVSYREIQVEDGNMPSAWSEAPEDVQGQIDKNNDDINNINLSLDALGNDGKLTRFERSLVRGYIADITGKYLNPTDTLPSLANIDADTYNAGKLYAIRRTARKIGMNLTTSVNYKPMGDAYTALVAYLNTFSPRPWDTSSSAVNNIPDRAVWNAKWNEYYNRYALFEIEVQDRQKEYTEQETQKMSKDTIAAISTTGNYDKVTYANPVNIKPPISTLGLPEFEGRHADSWVSNGSNLMTGTAFANTTGWDKWTAAAGRIGIYDIAAAGGKALYVETKDPTNGNPLPITSGTPIGLQSKGVTFAIKLGVKYTVSMKVATSELGDKLDYTYIMYSTAGGNQRIPDISVKSFPQENPITTGSATYYYAVNFTFTATRDDPAAYLLIGGNVKRDIPGSPTSWYGWIRVRELQVEEGTVATPYKLASSELWAGSGNRIRPVTNPLFTSGTDLTIWGKFYGDGTNNDKFYWNTNGAAIKEKKWMDVRLDDKQVWSISSAGTGFKRAKTEGFTYANAVPNSEIVIKNNGDYLVRDNATSKADTEILSTGVNTLWIAIDNNDSGWGGAYTPTKEEITAYFLGWKLCNGTFGTQYPGTGIKMWYPVGDKDLSRATVAGNAAPTEPSPSISDKSINYYQVVYQLVDAVQETVDFDGILELLATDNVVTTYFPTMTTPIEKGTIKYGTNLATVNQDTRYIIPSMVKRLSNAEQKITDDSITNTVFNSREYTLALKNKANASDLGNLATKDELGNVAGGVDGKIKDAMDKLDFSPYATKSELKQTATDITAKFSATGGMNLIKNSIGYSELDFWSLINTYKVDTISNASLDNLGFGKGFYFKANGQQQGITQDISVIPGQPYTLGWYLNKMTKGGDSNYRFWIQTQEYDGTSWVTINNIADNKDVTTNGFEARYMVFTPTKDKVRIRFIGYAQVEAIVSGIMLNIGDVALQWTLATGELYNTNIRMNINGIRVSQLDSNGSEIGFTQITPSEFAGYYQNNGSFEKVFYLNGDETVTKKLRATDEITLGNIKVLSIQSANSTGWAFVSNKL
Physico‐chemical
properties
protein length:1244 AA
molecular weight: 137304,88680 Da
isoelectric point:5,47419
aromaticity:0,11093
hydropathy:-0,39711

Domains

Domains [InterPro]
DC_1746
STR
2–300
DC_1746 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
61–215
G3DSA:2.60.120.260 DC_0015
QFP93355.1
1 1244
Architecture
STR
STR 2-1244
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp15
[NCBI] 		2608370 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93355.1 [NCBI]
Genbank nucleotide accession
MN364664 [NCBI]
CDS location
range 63331 -> 67065
strand -
CDS
ATGGCAAAATATAGAGCGACTGGACAGACAACTCTATTTAACGTAAATGATGCTGTCGCAGATACGAAGCCACCTACCAACCCTAAAGAGGGTGCGTTGTGGTATAACACGACTGATAATAAATTTTACATATATACGAATGGTGAATGGAAGTTCGCTGCCGAGGGTATGATTCTCGGAGGTACAAACAAAGTAATAAACTCGACATTTAAAAAAGATACTACTAGTTGGAGAAACGTATCAACTCTATACAAAGTTGTAGCCGCAGAGTCGGATAAACCTAATAGTAAGATTCTGCAAGTAACACGAACAGGTCAAGGGTCTGTAAGTATCGCTAGTGCGTATAGTAACGTATATAGTGTTAAGACAGGTGACACAATTACAATAACTATGGACGTTAGAGTTACAGATACTACGGCTTACGATGTCACTGCGCCATTCATTGTAGAGTTTTACGATAGTACAGGGAAACGAGTACAGTTTAGAGATATTTACTTCAAAGACTGTAAAGTTACGACAATCGAGAGTAACAAGTGGTACCGACTAGTATACACAATAACAGCAACAACTGCCGACATTGTATCAGGTTCTACTCGACTAGCTTTATTCCAAAACGGTCAAGTATCCTATCGAGAAATCCAAGTAGAAGACGGGAACATGCCCTCTGCGTGGAGTGAAGCTCCTGAGGACGTACAAGGACAGATTGATAAGAACAATGATGATATCAACAATATTAACCTGTCATTAGACGCACTAGGTAATGATGGAAAACTTACCCGTTTCGAGCGTAGTCTAGTTCGTGGATATATCGCAGACATTACTGGTAAGTATTTAAATCCAACAGACACGCTACCATCACTAGCTAACATTGATGCAGATACGTACAACGCAGGTAAACTGTATGCGATCCGTAGAACTGCACGCAAGATTGGGATGAACCTGACAACTAGTGTAAACTACAAACCGATGGGTGATGCGTATACGGCGCTAGTAGCGTACTTAAACACGTTCAGCCCTAGACCTTGGGATACGTCATCAAGTGCTGTAAATAACATTCCTGATAGAGCAGTATGGAACGCTAAATGGAATGAGTATTACAATCGTTACGCTCTATTCGAAATCGAGGTTCAGGATCGTCAGAAAGAGTATACAGAGCAAGAGACACAAAAGATGTCTAAAGATACAATTGCGGCCATTAGTACAACAGGTAACTACGACAAAGTTACATACGCAAATCCTGTAAACATCAAACCACCTATTTCAACTTTAGGTCTTCCTGAGTTTGAAGGTCGTCATGCAGATAGTTGGGTATCTAATGGAAGTAACTTGATGACAGGTACAGCTTTCGCTAATACCACAGGTTGGGATAAATGGACAGCTGCGGCAGGTCGTATCGGTATCTATGATATAGCTGCGGCAGGAGGTAAAGCTCTTTATGTAGAGACTAAAGACCCTACTAACGGAAATCCATTACCAATTACTAGTGGGACACCAATAGGTCTCCAAAGTAAAGGGGTTACGTTTGCTATAAAATTAGGAGTCAAATACACGGTGTCAATGAAAGTAGCGACAAGTGAGTTAGGTGATAAGTTAGACTACACATATATCATGTATAGTACCGCAGGTGGAAACCAAAGAATACCTGATATTAGTGTAAAGAGTTTCCCTCAAGAGAATCCAATTACCACAGGTTCAGCTACTTACTACTATGCAGTTAACTTTACTTTTACTGCGACTAGAGACGACCCTGCCGCTTACCTGTTAATCGGTGGTAACGTCAAACGAGACATCCCAGGTTCTCCTACAAGTTGGTACGGCTGGATACGTGTTCGAGAATTACAAGTAGAAGAGGGTACAGTAGCAACACCTTATAAACTAGCTTCTAGCGAACTTTGGGCAGGATCGGGAAACCGTATTCGTCCTGTAACAAACCCACTATTCACTAGTGGTACAGACCTAACTATTTGGGGTAAATTCTACGGAGATGGTACGAATAACGATAAGTTCTACTGGAACACAAACGGTGCTGCTATTAAAGAGAAAAAATGGATGGATGTCCGCTTAGATGATAAACAAGTATGGTCAATATCTTCAGCAGGTACAGGGTTTAAACGTGCTAAGACTGAAGGTTTTACCTACGCTAATGCAGTGCCGAACTCTGAAATTGTCATTAAGAATAACGGTGATTATCTAGTAAGGGATAACGCTACGTCCAAAGCAGATACAGAAATACTTAGTACAGGTGTTAACACATTATGGATAGCTATTGATAACAACGATAGTGGTTGGGGTGGAGCGTATACTCCAACGAAAGAAGAAATCACCGCTTACTTCTTAGGTTGGAAGCTATGTAACGGTACTTTTGGAACGCAGTACCCAGGTACAGGGATTAAAATGTGGTACCCAGTAGGAGATAAAGACTTATCTCGTGCTACTGTAGCAGGTAACGCTGCACCAACAGAACCATCACCATCAATCAGTGACAAATCTATAAACTACTACCAGGTTGTATACCAACTTGTGGACGCAGTTCAGGAGACAGTAGATTTTGATGGTATACTAGAACTGTTAGCAACTGATAACGTTGTAACTACTTACTTCCCTACCATGACAACGCCTATTGAAAAAGGTACGATTAAATACGGTACTAACCTAGCTACGGTGAACCAAGACACACGTTATATTATCCCTTCTATGGTTAAACGTCTCTCTAACGCAGAACAGAAGATTACTGATGATTCTATCACGAATACAGTCTTCAACTCAAGAGAGTACACTCTAGCCCTAAAGAACAAAGCGAACGCTAGTGACCTAGGTAATCTTGCTACTAAGGATGAATTAGGCAACGTAGCAGGTGGGGTAGACGGTAAGATTAAAGATGCTATGGACAAGCTAGACTTCTCTCCATATGCAACTAAATCTGAGTTGAAACAAACTGCTACAGATATCACTGCTAAGTTCTCTGCCACTGGCGGCATGAACTTAATTAAGAACTCTATCGGTTATAGTGAACTAGACTTTTGGAGCTTAATTAATACTTATAAAGTGGACACAATCTCGAACGCATCTCTAGACAACCTAGGATTCGGTAAAGGTTTCTACTTTAAAGCTAACGGACAACAGCAAGGGATTACGCAAGATATATCGGTTATCCCTGGACAACCATATACGCTAGGTTGGTACTTGAACAAGATGACAAAAGGTGGAGATTCTAACTACCGTTTTTGGATTCAGACGCAAGAGTATGACGGTACAAGCTGGGTTACTATTAACAACATAGCGGATAACAAAGACGTGACAACAAACGGATTCGAAGCCCGTTATATGGTGTTCACACCAACGAAAGATAAAGTACGTATCCGTTTCATTGGGTACGCACAAGTAGAAGCTATCGTTTCAGGTATCATGCTTAACATCGGGGACGTTGCACTCCAATGGACTCTAGCTACGGGCGAGCTGTACAACACGAATATCCGAATGAACATTAATGGTATCCGTGTATCCCAGTTAGATAGTAACGGTAGTGAAATTGGGTTCACTCAAATCACACCGTCAGAGTTCGCAGGATACTACCAAAATAACGGATCGTTCGAGAAAGTATTCTACTTGAATGGGGATGAGACGGTAACGAAGAAGCTTCGAGCAACGGACGAGATTACGCTAGGGAACATTAAAGTCCTTTCTATACAGAGTGCTAACTCTACAGGTTGGGCGTTCGTATCCAATAAACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a5539a1f386c9a9e72ec33e45a11ccd5a5826f9a7eecb95c81b7525de4d4b18d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2748
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a noval phage sp-15 Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2021-07-02 — GenBank