Protein

View in Explore
Genbank accession
QBQ81253.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGTYEAALGNAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSQVGQFTAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYIYNSGLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAHRGHNWFYVCNSNIRGYVGKKGTVPANVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDGYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPTYPGAGNYYRALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGVAWQVQGRRQHSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHADEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63752,29610 Da
isoelectric point:8,40160
aromaticity:0,11765
hydropathy:-0,20908

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
QBQ81253.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ81253.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0385
Central domain 11 225 216 0,6567
C-terminal 226 595 369 0,8646
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-225
C-terminal
226-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdH2
[NCBI] 		2508174 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus HdH2
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ81253.1 [NCBI]
Genbank nucleotide accession
MK373796 [NCBI]
CDS location
range 106933 -> 108720
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGATGGTACTTATGAGGCTGCATTAGGTAATGCCGGGAATGGGTTTTTTGTATGTCAAATGCCCTCTGACATAATAAATATTAAATCCAACGACCCAGGTAGAGTTATACTAACTGCTATTGAGATAAATGGTACTCACAGAGCTTTTCTTAATGGTACTCAATCTCAAGTTGGTCAATTTACTGCATTTTTTGAAGATCCGCCTATTGGTAGGGCAGGTGCAGAAGTAGGTCTTACGTCAGCTTTTGCATCCGGTAATAGTTTAGCACATGGCACCTATATTTATAACTCTGGTTTAGGGCATGAAGAATCAATTGCTAGGCAGGGTACAGGTGGTACCATATCTCAAGCCTCTGGGTTTAATTTATATAGACCGGGAGGAGCATATGCTGGTGAGGCTATAGGTAGGGCATGGACTTTAGCAGGATTTCCAGCAGGAGCGTCTACAGTACCTATAGATGGTGGTAATGCTGACTACTGGCACCCTAATTGGCAAGCTCCTATAGGGGCCGCCCATAGAGGGCATAATTGGTTTTACGTTTGTAACTCTAATATACGAGGTTATGTAGGTAAAAAGGGCACAGTACCGGCTAATGTTAACTTATTGTATCAATCTCCTACTTACCCTGATAAGGTTTACATATGCAAAGGTTCAACATCTAATTTAGCGGCACAGGCCGCTAAGAAAGTATATGTGCAGGATGGTTATAATATTACACCTACCAAAGTTATTTGGTATGTACTTAATCTAAGGTACTCTAATGGTAATATGGGCGTATCCGGTAATCCATTTACTGGGTCAGATATACTTATAACTCCATCTAATTTTACTATAAAAGGGGTTAGTTTACCAAATACTGGATATAAGTTTATCAACCAAAATGCTTTTGGTAACTTAGGCTATAGGCCAGATATGGAGTACATTGGAAATAACGCAGCGTACACTGGAGCCTTCGGGGATACTACTGCGCGCTGTGAAATTGTAGGATCTAGTAATGGATCTTTATGGTCTCCCGTAGATTATGGAGGGGCTAAGTCTCAAATTAGTATTTACAAATTCGGAGCGGGTAAACAATGGTACGTAAACTCAAGTAATAACACTATAGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCCTTAAGACTATTTCCTAATAATGTTGCTAGCACTTACGTTGGCGATGATATAACTCCAACATATCCTGGAGCAGGTAACTACTATAGAGCTTTGGCCACCATAGGATTAGGATTGCCTAATGCTAACGCAACAGTAATATTAACTACTGAAGTTATCATGGGGAATATTAATACCGCAGGAGGAGCTATACGCACATATGGTGGTGTTGCTTGGCAAGTACAAGGAAGAAGACAGCATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATACTTAGTCCCTTATCACTCCACTACTGCATACAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCACGCTGATGAGGCTGCAGCTATTTTCCTACCGAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d45ebeadfa2ff5a37be10b230888d988418271376cf710bf0a02caa158e6f514
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank