Protein

View in Explore
Genbank accession
WWO60451.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MSEAQSHSLILRQHEFECGGTYQVRSGQSLMDMLLEASGGLPVHPSVEVRVGGVIAPREMWPRVKPKVGTSICVTNMSLAGGGNGVLRALLLVVVAVASVYTGGAVGAAYGAAYGAAASVAVTIVGTLIVNAIAPLPTPGGGLSGADRQWNQLTGTSNQINPWGPIPIVLGECRYFPPHAAIPYSENVGSDSFQYCMFDLGYGDVEASDFRIGDSPFSSYTNLTYEVNKSPTIYTSDVAETVVNFSMNEDGNVATRTTAADVDSISLDILFPTGLLGFGTSGKDFPMWVVYRVAIREAGTSGAFLNVVTTRLSKMSSTWTPQVGSNQSPSFPPSAGLYIVKTKDKNPFAAGLSLSVPKGQYEVRVTRVATLQGGSSNTYVSASTWTLLRSIRAVNPSNTGTNKLTMRIQATDQVTGTLQTLSCLVRQRIRVYDSGSGTWSAPQFNLNPAWVAYWLITECEALSKKIPASRVDLDSFVSFANFCSQNGFETRDCQDVESTAGDLLKKVLSNSLASIGQRDGKYCIVFEPTGFQQHKMSFTPLDMTSFSESRLFIVPPDALRIQFKNPDSDWQEDELVVVRDGFSYLGRDARGNSSSDPAAQTFQIIRLEQAVKPRQAWMIARYHLAQSIYRQSNYTWGTDISGVICTRGDVVELSHDVAENWVGGGRVISHSDSAPSGFAGTIKIDTDVDLDYSKEYTIQISRAAGDSFTVNCKPHSARSNTFYLSSAVSGVEYGQIVMVGVRGVEKKKVVISSIKYSSDYSATFYGVDYDERIGAYWTSPPSSIVTELGERSYAVPAPPVINAVISSLANDQTNDAGIASPVIRISSKQSSRHLEVLQ
Physico‐chemical
properties
protein length:838 AA
molecular weight: 90426,68230 Da
isoelectric point:5,80908
aromaticity:0,09069
hydropathy:-0,10048

Domains

Domains [InterPro]
DC_0129
STR
1–831
DC_0129
IPR055385
ATT
238–392
IPR055385
WWO60451.1
1 838
Architecture
STR
ATT
STR
STR 1-237 | ATT 238-392 | STR 393-831 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWO60451.1
1 838
Domain Start End Length (AA) Confidence
N-terminal 1 666 666 0,7515
Central domain 667 827 162 0,1858
C-terminal 828 838 10 0,1735
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-666
Central
667-827
C-terminal
828-838

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SOVA965
[NCBI] 		3117470 No lineage information
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60451.1 [NCBI]
Genbank nucleotide accession
PP079418.1 [NCBI]
CDS location
range 16504 -> 19020
strand +
CDS
ATGTCGGAAGCTCAAAGCCATAGCCTTATCCTGAGGCAGCATGAATTTGAATGTGGCGGGACATATCAGGTCCGTTCAGGGCAGAGTCTTATGGACATGCTTCTAGAGGCATCTGGCGGACTGCCCGTTCACCCCAGTGTCGAAGTTCGGGTTGGCGGAGTTATCGCGCCTCGTGAGATGTGGCCTCGCGTAAAGCCAAAGGTCGGAACGTCAATATGCGTGACAAACATGTCCCTCGCAGGCGGCGGAAATGGTGTTCTTAGGGCTCTGCTACTTGTAGTTGTAGCTGTTGCATCTGTATACACTGGCGGCGCAGTTGGAGCCGCTTACGGAGCAGCGTATGGCGCGGCCGCATCTGTGGCTGTGACTATCGTAGGAACTTTGATTGTTAACGCAATCGCACCTCTACCTACGCCTGGTGGCGGGTTGTCTGGAGCGGATAGGCAATGGAACCAACTTACCGGAACATCAAACCAAATTAATCCGTGGGGGCCGATTCCTATTGTCTTGGGAGAGTGTAGATACTTCCCGCCTCATGCTGCTATCCCGTATTCTGAAAACGTAGGGTCTGACAGCTTTCAATATTGCATGTTTGATCTTGGATACGGCGATGTAGAGGCCTCCGATTTCAGGATTGGAGATAGCCCGTTTAGCTCATATACGAATCTTACATATGAGGTCAATAAGTCTCCTACAATTTATACTAGCGATGTGGCTGAGACTGTAGTCAATTTCAGCATGAATGAGGATGGCAACGTAGCCACTAGAACTACTGCGGCAGACGTTGATTCAATTAGCTTGGATATCCTTTTCCCTACCGGCCTCCTTGGATTCGGGACAAGCGGAAAGGACTTCCCCATGTGGGTTGTCTATAGAGTAGCTATCCGCGAGGCAGGAACTTCAGGCGCATTCCTTAACGTAGTTACTACTAGGCTATCTAAAATGTCCAGCACTTGGACGCCCCAGGTCGGCAGCAATCAGAGCCCATCCTTCCCACCTAGTGCTGGCCTATACATTGTAAAGACTAAGGATAAGAATCCATTTGCGGCGGGACTATCTCTTTCTGTCCCCAAGGGTCAGTATGAAGTCCGAGTTACTCGCGTTGCTACACTTCAAGGTGGCTCATCTAACACTTACGTCTCTGCGTCTACATGGACTCTTCTCCGTTCAATCCGTGCTGTAAATCCTTCTAACACCGGCACTAATAAGCTGACAATGAGGATTCAGGCTACGGATCAAGTAACCGGAACTCTTCAGACTCTTTCATGCCTTGTTCGTCAAAGGATCAGGGTGTATGACAGCGGAAGCGGAACTTGGTCTGCACCTCAGTTCAATTTGAATCCTGCATGGGTAGCCTATTGGCTTATTACTGAGTGCGAGGCTTTATCAAAGAAAATTCCTGCAAGCAGAGTTGATCTAGATAGTTTTGTCTCTTTCGCTAACTTCTGTTCTCAGAATGGTTTTGAGACTAGAGATTGCCAAGATGTTGAGTCTACTGCTGGCGATCTTCTTAAAAAGGTGCTATCTAATTCTCTAGCTTCAATTGGACAGAGGGACGGTAAATATTGCATTGTCTTTGAGCCGACTGGATTCCAGCAGCATAAGATGAGCTTTACTCCGCTAGATATGACTTCATTTAGCGAAAGTCGTTTGTTTATTGTGCCTCCTGATGCCCTGAGAATCCAGTTCAAAAACCCTGATTCCGACTGGCAGGAAGATGAGCTAGTGGTGGTCAGAGATGGATTTTCCTATCTCGGCAGGGATGCAAGAGGAAATTCAAGCTCTGATCCTGCTGCCCAAACATTCCAAATCATCAGGCTTGAGCAAGCTGTAAAGCCTAGGCAGGCATGGATGATAGCCAGGTATCATCTTGCCCAGTCAATTTACCGTCAATCAAATTACACGTGGGGAACGGATATCTCTGGCGTCATCTGTACAAGGGGTGATGTTGTCGAGCTGAGCCATGATGTAGCTGAGAATTGGGTTGGTGGTGGTCGAGTAATCAGTCATTCGGATTCTGCACCCTCTGGGTTCGCTGGAACTATTAAGATTGATACGGATGTTGATCTAGATTATTCAAAAGAATATACAATCCAGATTTCAAGAGCTGCCGGCGATTCATTTACAGTAAACTGCAAGCCTCATAGCGCTAGGTCAAATACATTCTATTTGTCCTCTGCTGTTTCTGGAGTTGAATACGGGCAAATTGTTATGGTTGGTGTGCGCGGAGTAGAAAAGAAGAAGGTCGTAATCTCTTCAATAAAATACTCATCTGACTATTCAGCGACGTTCTATGGCGTAGACTATGATGAAAGGATTGGCGCTTATTGGACTAGCCCGCCATCCTCTATTGTTACTGAGCTTGGGGAAAGGTCATATGCTGTGCCTGCGCCGCCTGTAATCAACGCTGTAATATCTTCCCTGGCTAACGATCAGACGAACGATGCTGGAATTGCATCTCCAGTTATACGCATTTCATCAAAGCAAAGTTCAAGGCATCTAGAGGTACTACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2aeac907c6909964c9371feb194830d3e32d7eaa83ddeb137490dc9c0dc66837
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8110
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank