Protein

View in Explore
Genbank accession
XUQ15661.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNISQAVTVTAAQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGTSQAVGTRGGSANITWSGMVSGTALTLDQIPSHNHIQGYGSNRIEGGRFGTASNQSSRQEEAFGGNPTSSAPYTSSVGGGQAHDHSVSINMPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:220 AA
molecular weight: 22889,41990 Da
isoelectric point:6,95467
aromaticity:0,07273
hydropathy:-0,07864

Domains

Domains [InterPro]
DC_2164
STR
3–220
DC_2164
SSF88874
STR
60–219
SSF88874
XUQ15661.1
1 220
Architecture
STR
STR 3-220
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUQ15661.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,9867
Central domain 59 209 152 0,0008
C-terminal 210 220 10 0,9982
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ps1.PMD
[NCBI] 		3423647 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUQ15661.1 [NCBI]
Genbank nucleotide accession
PV641624.1 [NCBI]
CDS location
range 10938 -> 11600
strand +
CDS
ATGGGTCTTGAGGTCGCAACTTATATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCACCTGAGACTCATTAAGAGTGCTATTAAGAATACCTTCCCCAATATTTCTCAGGCTGTCACTGTAACGGCAGCCCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAGCCTGGGATGGTTATCATGTGGGCTGGGTCACTGGCTCAGATCCCAGCAGGTTGGAAACTTTGTAATGGTGTAGGGACTACCTCTAATGGTATCCCCGTCCCTAACCTGATTGGTGCATTCCCCTGGGGTATCGATGGTACTTCCCAGGCTGTAGGGACTAGAGGTGGTAGCGCTAACATCACATGGAGTGGTATGGTCAGTGGTACTGCCCTGACGCTGGATCAAATACCCAGCCACAACCACATCCAGGGTTATGGTAGTAACAGGATTGAAGGTGGTAGGTTCGGTACCGCATCTAATCAGTCATCTAGACAAGAGGAAGCCTTCGGTGGTAATCCTACATCGAGCGCCCCCTACACTAGCTCTGTTGGTGGTGGTCAAGCACACGACCACTCAGTATCCATTAACATGCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
efd09acf90c52e8bb49404caa6fbc6ada901e20a69c6787562ba8348233f48a3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7919
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages against diabetic foot ulcer origin Pseudomonas aeruginosa effectively control the infection murine model Akram,S. and Abbas,Z. 2026-01-08 — GenBank