Protein

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Genbank accession
CAA62098.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQTLTYVIGQDRRTLVKDIQNFKIDFSDTTYNWVQARQYERTMRQLFVNVKNEDGTPYDLTGCNVWFQGKLPDNTHRIIDAKHSVMIDPTNGQFRFDLPAQAFAVAGSYVQAFFRIMRNGNNLATLEFNLEVLADTVISGLIPADYITPFEDLYDQLETIFNNADGDLKAKLSEWEDKLTTKFSQWSSDYDTIQAAVTAIKSQVAALVDKIATNGLLTVSEFQEAIKPINDLLVGKVSIDESLDIGGKIDRSWATQVDDFIAKLPAGGFKLAIVSDSHYEDLYDESSPYSYPYTADAFKHLNAFNRLGNAVNVMIAAGDNVNGLDGDVQHTIADGTVYATKLLQTSMTADKYVLLGNHDDNSPQLRLGNLYSQDVITDDQFKAIYQTSDLINGENRSDGSLYFYKDYQYQKVRLIGLNSFDVPEGVTNTDGTVKYPRYLISNYSQNQINWLANVALKNIPADYQIVVVTHAPLPHGYSLTNEIRMYNQTIVEGLLNAVATGTSYSGKSDTGTPEECQVSIVTDYNPQGPRPIAGFFGGHVHQEIIKPLDHFTNCVVLADANTDQGNVGTINELGITVVTIDTANRKVTLNGLGRATDRQFTY
Physico‐chemical
properties
protein length:602 AA
molecular weight: 66980,96780 Da
isoelectric point:4,72522
aromaticity:0,10133
hydropathy:-0,29402

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
21–138
G3DSA:2.60.40.3350 IPR029052
IPR018913
ATT
31–157
IPR018913 IPR029052
DC_1957
STR
35–508
DC_1957
IPR004843
ENZ
270–541
IPR004843
CAA62098.1
1 602
Architecture
ATT
STR
ATT 21-157 | STR 158-586 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phig1e
[NCBI] 		52979 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus
[NCBI] 		1578 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAA62098.1 [NCBI]
Genbank nucleotide accession
X90512.1 [NCBI]
CDS location
range 354 -> 2162
strand +
CDS
ATGCAAACACTAACGTATGTTATTGGACAAGATCGGCGTACTCTGGTTAAAGATATTCAGAATTTCAAAATTGACTTTAGCGATACTACCTATAATTGGGTACAAGCACGTCAATACGAACGCACGATGCGGCAACTGTTTGTCAACGTCAAAAATGAAGATGGTACGCCGTACGATTTAACCGGTTGCAATGTTTGGTTCCAAGGTAAGCTACCGGACAATACGCATCGCATTATTGATGCAAAGCACAGTGTGATGATTGACCCGACTAATGGCCAGTTTAGATTTGATTTGCCGGCACAAGCATTCGCGGTAGCGGGTAGCTATGTGCAGGCATTTTTCCGAATTATGCGGAACGGTAACAATCTCGCTACCCTCGAGTTCAACTTAGAGGTCTTAGCGGATACGGTGATCAGCGGCTTGATTCCGGCAGACTATATTACTCCATTTGAGGATTTATATGATCAGTTAGAAACAATTTTTAATAACGCAGATGGGGACCTAAAGGCTAAGTTATCTGAGTGGGAAGATAAGTTAACAACTAAGTTTAGTCAATGGAGCAGTGACTATGATACTATCCAAGCAGCTGTAACGGCTATTAAATCACAAGTAGCGGCTTTGGTAGATAAGATAGCTACCAATGGGTTGTTGACGGTCTCAGAATTCCAAGAAGCAATTAAGCCGATCAATGACCTATTAGTTGGTAAAGTATCCATTGATGAATCACTGGATATTGGTGGCAAAATTGACCGTTCATGGGCAACCCAAGTTGATGATTTTATCGCTAAATTACCAGCGGGCGGTTTCAAATTGGCAATCGTGTCAGATTCGCACTATGAGGACTTATATGATGAATCTAGCCCATATAGCTATCCATATACGGCGGATGCATTTAAGCATTTGAATGCCTTTAATCGGCTGGGCAACGCTGTCAATGTCATGATTGCCGCTGGCGACAACGTGAATGGGTTGGATGGTGATGTGCAGCATACCATTGCGGATGGGACAGTTTATGCGACGAAACTGCTACAAACTTCGATGACTGCGGATAAATACGTGCTGCTAGGCAACCATGACGACAATTCGCCACAACTGCGACTTGGAAATTTGTATTCGCAAGATGTTATCACTGACGATCAGTTCAAAGCGATTTATCAGACGTCTGACTTAATTAATGGCGAAAACCGCAGTGATGGCAGTCTCTATTTCTATAAAGATTACCAATATCAGAAAGTGCGATTGATAGGTCTAAACAGTTTTGATGTACCGGAAGGTGTGACTAACACTGATGGTACGGTTAAATATCCGCGTTACTTAATTAGCAACTATTCGCAGAACCAAATTAATTGGCTAGCTAATGTAGCACTCAAGAATATTCCAGCTGATTATCAAATTGTGGTGGTCACACATGCACCGCTGCCACATGGTTATTCATTGACTAATGAGATTCGAATGTATAACCAGACCATCGTGGAAGGGTTACTGAATGCGGTGGCGACCGGGACAAGCTACAGCGGTAAGTCCGATACTGGTACGCCGGAAGAATGTCAGGTCTCGATTGTAACTGACTATAATCCGCAAGGGCCACGACCAATCGCCGGCTTTTTCGGCGGGCATGTTCATCAAGAGATTATCAAGCCATTGGATCACTTTACGAACTGCGTCGTACTAGCGGACGCCAATACTGATCAGGGTAATGTGGGAACAATTAACGAGTTAGGTATCACGGTGGTCACGATTGATACGGCCAACCGTAAGGTGACATTGAACGGACTAGGTCGGGCAACTGATCGTCAATTTACTTACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0456934407fd86cd623256ec181bb17473c7e40f435887816f96090c5bfa9095
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8868
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome structure of the Lactobacillus temperate phage phi g1e: the whole genome sequence and the putative promoter/repressor system Kodaira,K.I., Oki,M., Kakikawa,M., Watanabe,N., Hirakawa,M., Yamada,K. and Taketo,A. 1997 9073065 GenBank