Protein

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Genbank accession
XYM59278.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDMVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDIEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNISATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIANVSADGKTITLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASASLTGKIGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVSIITDQILDEILDSDAMKELQESAQDSASKLNDYANSIIQNALANDADVRVMRKENGKRKAEISHTTVLIANETEARAAEITQLKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMEAGFTQVNEAIANESEARATSEAALDAKIGENSAALAQKLDSWANVDGVGSMYTMKLGLTYNGQEYNSGMALQLTAQGNNFVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGQYIQSNNFISGQQGWSINKSGASEFNNVVVRGALFAASGNFGFDGGNGVVINGNGVTVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126840,21430 Da
isoelectric point:4,59170
aromaticity:0,09478
hydropathy:-0,27696

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–867
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–713
IPR036116
XYM59278.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM59278.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,9089
Central domain 501 1080 581 0,0600
C-terminal 1081 1150 69 0,6016
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1080
C-terminal
1081-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PNU90
[NCBI] 		3414240 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM59278.1 [NCBI]
Genbank nucleotide accession
PV402688.1 [NCBI]
CDS location
range 16249 -> 19701
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTGGCCGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGAGTTATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGCTACATCCAGGGCTTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAACGGCGATATGGTCGGTTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGTTATCAAACCTACTTGACCGACAAAATCGACGGGAAAAACACGACTGGCGGTTACGATCGCAGCATCCGCGTAAACCTTCCGCAAGACTTCACGTCGCAGGTGCTTATTCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGACGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTCCAGGTTCCGAGTAACTACGACCCTGTTAACAGGACGTATGCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCTTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTGGATAAGTGGTCGCTCTATGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGAGGTATGGAACCGCGTTACCTGATGGATATGGTTGTGCAGTCGCAGGTTGAAGCCTTCCAGTTGGTGAGGGATGTTTGTTCCGCCTTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGACAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGACGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTACACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATATTGAACCAGTATTCAACCCGGACGCAGCCATGCGGTTCGGCCACAACCCGACCAGCATTACAGCGATCGGATGTACCAGAAGGACGGAGGCGAACCGCCGTGGGCGCTGGATTCTGCAAACGAACATAAGCGCAACCACCGTTTCGTTTTCTACTGGTCTGGAAGGTATGATCCCTTCGTGCGGCGATGTGATTTACGTTGCAGATCCGCACTGGCAATCAGCCTTCAACCTGGTGTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGAGATACGCTGATTCTGAACACTGACGACGGCAAGCCAGTGCGCCGAACCATCGCCAACGTATCGGCAGACGGTAAGACCATCACGCTAAACGTCGGCTATAATTTTGATGTTGCGCCGGACAGCGTATTCCTGATTGAAAGTGACCAGCTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCCATCACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGTATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTGTACGAGGTGCAATGGCGTAAGGATGGCGGCAACTGGAACAACGTGCCGCGCACAGCGACAACGCAGGTTGACATTGAAGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCGTGGTCTGCTTTGGCTAGTGCATCGCTGACCGGGAAAATCGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCCATGCCTGAAGGTGCAGAGGATACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCTTATCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTGAACTGGTACAAGGCGCGAAGTGTCGACAGGATCGGCAACGTTTCACCCTGGACTGATTACGCTCGCGGTATGTCATCGACTGACGTTAGCATTATCACAGATCAGATCCTGGATGAAATTCTGGATAGCGACGCCATGAAGGAATTGCAGGAGAGCGCACAGGACAGCGCGTCTAAACTCAACGACTACGCGAACAGCATCATTCAGAACGCGTTAGCCAACGATGCAGACGTCAGAGTTATGCGCAAGGAGAATGGCAAGCGGAAGGCGGAAATCTCGCATACCACCGTGCTGATCGCTAACGAGACTGAAGCGCGGGCGGCTGAGATTACACAGCTTAAAACGCAGATTGATGAGGATATCACGTCGCAGATTACGATCCTTAACGAAGCGCTGGCAGATGAAAGCGAAACGCGAGCAACCCAAATTAACCAGTTGCAAACACAATTTGGGGAGGATATGGAAGCAGGGTTTACGCAGGTTAACGAGGCGATCGCAAACGAAAGTGAAGCGCGCGCAACGTCAGAGGCAGCGCTAGATGCCAAAATCGGCGAGAACTCCGCAGCGCTGGCGCAAAAGCTGGATTCGTGGGCCAATGTTGATGGCGTAGGTTCCATGTACACAATGAAGTTAGGTCTAACGTACAACGGACAGGAATATAATTCTGGGATGGCGTTACAGCTTACCGCACAAGGAAACAACTTTGTTTCGCAAGTGCTGTTTATTGCCGATAGATTTGCTATTATCCGCAATGCTGCATCCGGTGCTTACACGCTTCCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAACAACGCGCTTATTCAGGATGGCTCGATTACCAACGCCAAGATCGGACAGTATATCCAGTCCAACAACTTTATTTCGGGCCAGCAGGGGTGGAGCATCAACAAGTCCGGCGCGTCTGAGTTCAATAACGTTGTCGTTCGTGGCGCGCTGTTTGCTGCGTCTGGTAACTTCGGATTTGATGGCGGAAATGGTGTGGTAATCAACGGTAACGGCGTCACCGTCAACCTTGACGGCGGCGGGCGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6e62b84b1f8a4279659f85d1e561e914428f9036f86201b535327f649976b024
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8034
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50