Protein

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Genbank accession
QSM04296.1 [GenBank]
Protein name
lysin A
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVLRANVEFAKRIFQDRVGNDYVYGGNWNPFNLKVGTDCSGLVIDICDAARNGTAMAWTRHGMSTESWRPIEVGQTGTIFNTICVASPNDFPADAAVKIAIHHGPGGGANSHMWCEVEGIRMESNGSDGCVTGNQARSVYDTSYANDWHYLPGPITGQVGVDPAGVLARATGLSAPRAAEILPAVSDGLKASQCTNVNRIAMWLAQVGHESAGFNATEEYASGAAYEGRADLGNTQPGDGVRFKGRSWIQITGRSNYGLFSQWAFKQRLVSTPTYFVDHPIELADLKWAGVGAAWYWTVARSDINALSDRQDLETVTRRINGGTNGLADRRDRYNRALLQGDALLQLLAPTETPDPIEELLMSGLAVPSLSIYADPGEPDVPVVDMIRALDAHGPHEPYVEKQARLGDADALRRVVRTAAGRGKYGTAAGPVNQAKDVLADIEATNPAVLQEFISQKGQS
Physico‐chemical
properties
protein length:461 AA
molecular weight: 49584,86080 Da
isoelectric point:5,35977
aromaticity:0,07809
hydropathy:-0,28004

Domains

Domains [InterPro]
DC_1733
ATT
1–160
DC_1733 G3DSA:1.10.530.10
IPR023346
STR
189–339
IPR023346
IPR023346
STR
195–335
IPR023346 DC_1763
IPR052354
Unmapped
197–338
IPR052354
QSM04296.1
1 461
Architecture
ATT
RBD
STR
RBD
ATT 1-160 | RBD 177-188 | STR 189-339 | RBD 340-461
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSM04296.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 165 165 0,4878
Central domain 166 387 223 0,4699
C-terminal 388 461 73 0,8373
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-165
Central
166-387
C-terminal
388-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage prophiGD27-1
[NCBI] 		2813254 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSM04296.1 [NCBI]
Genbank nucleotide accession
MW584196 [NCBI]
CDS location
range 53365 -> 54750
strand +
CDS
ATGGCCGTCCTACGCGCGAACGTTGAGTTCGCGAAGCGGATCTTCCAGGACCGTGTCGGAAACGACTACGTCTACGGCGGCAATTGGAATCCGTTCAACCTCAAGGTCGGTACCGACTGCTCCGGTCTGGTCATTGACATCTGCGATGCTGCGCGTAACGGGACCGCGATGGCCTGGACTCGGCATGGGATGTCCACCGAGAGCTGGCGGCCCATCGAGGTGGGCCAGACCGGAACGATCTTCAACACCATCTGTGTCGCGTCGCCGAATGACTTCCCGGCTGATGCTGCGGTGAAGATCGCCATCCATCACGGTCCCGGCGGTGGGGCGAACAGCCACATGTGGTGCGAGGTTGAAGGAATCCGCATGGAGTCCAACGGCTCCGATGGGTGTGTGACCGGCAACCAGGCACGGTCCGTGTACGACACCAGCTATGCGAACGACTGGCACTACCTGCCGGGACCCATCACAGGCCAGGTAGGTGTCGATCCCGCAGGAGTGCTGGCACGCGCCACCGGACTGAGCGCCCCCAGGGCCGCCGAGATCCTGCCCGCCGTGTCCGATGGGCTCAAGGCCAGCCAGTGCACGAACGTCAATCGGATTGCGATGTGGCTGGCACAGGTTGGCCACGAGTCAGCCGGCTTCAATGCCACCGAAGAGTACGCCTCCGGTGCCGCCTATGAAGGGCGTGCAGATCTGGGTAACACCCAGCCGGGGGACGGGGTGCGGTTCAAGGGCCGCAGCTGGATCCAGATCACTGGACGCAGCAACTACGGGCTGTTCTCCCAGTGGGCGTTTAAACAGCGGTTGGTCTCGACGCCGACCTACTTTGTCGACCACCCCATCGAGCTCGCGGATCTGAAGTGGGCCGGTGTTGGTGCGGCTTGGTACTGGACGGTGGCCCGCTCGGACATCAACGCCCTGTCGGATCGGCAGGACTTGGAGACGGTCACGCGCCGAATCAATGGCGGCACCAACGGCTTGGCTGATCGCCGCGACCGATACAACCGCGCCCTGCTGCAGGGTGACGCGCTGCTGCAACTACTCGCCCCCACTGAAACCCCCGATCCGATTGAGGAGCTACTGATGTCCGGTCTTGCTGTCCCCTCACTGTCTATCTATGCAGACCCGGGGGAGCCCGACGTGCCCGTTGTCGACATGATCCGCGCCCTTGACGCTCACGGCCCTCACGAGCCGTATGTCGAGAAGCAGGCACGTCTGGGTGATGCCGACGCACTGCGGCGTGTGGTCCGCACCGCCGCAGGACGAGGCAAGTACGGCACAGCGGCCGGGCCGGTCAATCAGGCCAAAGACGTACTCGCTGACATCGAAGCCACCAACCCTGCAGTCCTGCAGGAGTTCATCTCTCAGAAGGGACAGTCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f22df32655607f4e6771073e78f6430682c1ed1bb3ff88068099a3454e7820be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50