Protein

View in Explore
Genbank accession
QBX23556.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MLLDNERQGALNYYDDLWTRQLPTGSSVFEFSVYKKSLLGDNPLNHKYHALNDQAFVSFVHKGKVQLFNIMQVEETETTIRCLCENLNLELLNEYCNAYKATKAMSFEEYLVQFDILNWGALTIGTNEVEDKKLTLEWTGQDTKLARLLSIANNFDAEIEFETQLHNNHTFKAFIVNVYKEYEEGVSYGVGRDRSDIVLRYQKNVNGITKKLDKRQIHNAIRPYGKKTVKGERVISNPITRKVTKTVGSNRTYLGGDLKYYGHIIKKANVQSIINYAVQYNILPSGIICQLYLESLWGDSAVGKRDNNWAGISGGAQTRPSGVKVTTGMARPANEGGTYMHYASVDDFLKDYTYLLAKQGLYNVVGKKNIADYTKGLFRVGGAKYDYAAAGYQHYISTMTSIRDGINKVSGNILNTIDTLWQTPVKPISTTNIVKRATKTIDALNAANGLKGRRIGSGQCYALSGWYAKRLDGAWIDSSIGGIRGRTGAGMAAALIGTDYNWGAYGWKVDKAPTAKTLQAGGIYNVKANRGAPFYTSVWGHTGIIKSVSSTQVIVLEQNFAGRMYVVENAYSIGSFVSGLQTVCYPREIAQGMSVTGATTQQISGGTQISYEEIVQEAQTETYEEEQTIYIDNAVYKEWKDENGKVEFYLKNGFLYAPLSRDRYPSVLTGNETRDNWIRKDMEVETDSQDVLISTALKDLKAHAYPAITYEVDGYVDLELGDAVRIQDDGYEPPLILTARVIEQEISRTNPNSNKTKFSNFVEKKSQLASDLISDMLRLYDESIPYDIQLATSNGVAFKNGVGESVLTPSLQKNGKDYDAIYFYKNGDSLIDIGPSLTVKASDFSHVLNVTVEAYVNDEKVASKQISFTDTEDGTDGKDGLPGPQGPPGIDGLQGPRGEQGIPGPAGADGKATYTHIAYALDETGTTGFSVSDNTGKTYIGMYVDDNIIDSNDPKKYKWNLIKGADGARGIQGPAGADGKTPYWHVAYANSSDGKTDFSVTDSLNKRYIGQYTDYIAIDSSDPTKYRWTDMVGTVFVGTNNLIDGTKLFVGSDWFTSATLEDENISNYPFTFKKWISGQKVSHAKDIIVEQGVTYTFSAYVKREVAGNLYFYLYDIADGFITSDTPRETIIKNVDSNVRRFEITFTPTKTGKIRPRFAMVSSEQGSFSTGGFMLVRGNKTGDWQESESDKASNLDSKADGAFTVEQLNAIAEEQRLMKANLEATASLQEVQDKAKELLDQIKKIEDGQKVSEQTMVSNANRVVQILAKLDDVQLVTEAITQYMSYSDDGLVIKMKDGTSSVRVTTDRISFYSGGTETAFISQGFLQIESGVFTLRLRIGSFLFEESSKGRLQIKKIRGIGG
Physico‐chemical
properties
protein length:1361 AA
molecular weight: 150773,28950 Da
isoelectric point:5,68512
aromaticity:0,10213
hydropathy:-0,41051

Domains

Domains [InterPro]
DC_0558
ATT
1–388
DC_0558 IPR007921 G3DSA:2.60.120.260 Coil
IPR002901
ENZ
257–393
IPR002901
IPR002901
ENZ
272–384
IPR002901 G3DSA:3.90.1720.60
DC_1027
STR
301–1360
DC_1027
QBX23556.1
1 1361
Architecture
ATT
STR
ATT 1-388 | STR 389-1360 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX23556.1
1 1361
Domain Start End Length (AA) Confidence
N-terminal 1 295 295 0,8783
Central domain 296 646 352 0,5305
C-terminal 647 1361 714 0,0269
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-295
Central
296-646
C-terminal
647-1361

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan14
[NCBI] 		2548001 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus agalactiae BSU451
[NCBI] 		1105232 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus agalactiae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23556.1 [NCBI]
Genbank nucleotide accession
MK448851.1 [NCBI]
CDS location
range 31721 -> 35806
strand +
CDS
TTGCTTTTAGATAATGAGCGACAAGGAGCACTTAATTATTATGATGATTTGTGGACTAGACAGCTCCCAACTGGTTCGTCAGTCTTTGAGTTTTCTGTTTATAAAAAATCGTTGTTGGGTGACAATCCACTTAATCACAAATATCACGCACTAAACGATCAAGCATTTGTCTCTTTTGTACACAAAGGTAAAGTACAATTGTTTAACATCATGCAGGTCGAGGAAACAGAGACAACGATACGTTGCCTTTGCGAAAATCTTAATTTAGAGTTACTAAACGAGTATTGCAACGCATATAAAGCAACTAAAGCAATGTCGTTTGAAGAGTATCTTGTGCAGTTTGATATTTTAAATTGGGGTGCTTTGACAATTGGCACAAACGAAGTCGAGGACAAAAAATTGACATTGGAATGGACTGGTCAAGATACTAAGTTAGCTCGTCTTTTGTCAATTGCTAATAATTTTGATGCAGAAATCGAATTTGAAACTCAATTACACAACAACCACACTTTTAAAGCGTTTATTGTAAATGTGTACAAGGAATATGAAGAGGGAGTGTCTTATGGCGTAGGTCGTGATCGCAGCGATATAGTGTTGAGATATCAAAAAAATGTAAATGGTATCACTAAAAAATTAGACAAGCGCCAGATTCACAACGCCATCCGCCCGTATGGCAAAAAAACTGTTAAAGGCGAACGTGTTATTTCTAATCCTATAACTCGTAAAGTCACTAAAACGGTTGGTTCAAATCGTACATATTTAGGTGGAGACCTCAAGTATTATGGTCATATAATCAAAAAAGCTAACGTACAATCTATTATTAACTACGCAGTGCAATATAATATTTTACCGAGCGGAATTATATGTCAACTGTATCTAGAAAGTCTTTGGGGTGACTCGGCAGTTGGTAAACGTGACAATAACTGGGCAGGTATAAGCGGTGGAGCACAGACACGGCCTAGTGGAGTAAAAGTTACTACTGGAATGGCTCGTCCTGCTAACGAGGGCGGAACATACATGCACTACGCAAGTGTTGATGACTTTTTAAAAGATTATACTTATCTTTTAGCTAAACAAGGACTATATAACGTAGTTGGCAAAAAGAATATAGCGGACTATACAAAAGGTTTGTTTCGTGTCGGTGGTGCTAAATATGATTACGCAGCAGCAGGATATCAACATTACATCTCAACCATGACCTCAATACGTGATGGGATAAATAAAGTTAGCGGAAATATCTTAAACACTATTGATACTTTGTGGCAAACGCCAGTCAAGCCGATATCGACAACAAACATCGTCAAACGTGCTACAAAAACAATCGATGCGCTAAATGCTGCTAACGGTTTAAAAGGTCGCAGAATTGGTTCTGGACAATGTTATGCGCTGTCAGGCTGGTACGCTAAGCGATTAGACGGTGCTTGGATTGACAGCTCAATCGGTGGTATTCGTGGTCGTACTGGTGCTGGTATGGCTGCTGCACTAATCGGTACTGATTATAACTGGGGAGCTTACGGTTGGAAGGTAGATAAAGCGCCAACGGCTAAAACCTTGCAAGCTGGCGGTATCTATAATGTCAAAGCTAATCGAGGTGCTCCATTTTACACTAGCGTTTGGGGACATACTGGAATCATTAAGAGCGTGTCTAGTACGCAAGTTATAGTATTAGAGCAAAACTTTGCTGGTCGTATGTATGTTGTCGAAAACGCCTATTCTATCGGCTCGTTTGTTAGTGGTCTGCAAACAGTATGTTATCCTCGTGAGATTGCTCAAGGGATGTCTGTTACTGGGGCTACAACACAACAAATCTCTGGCGGTACACAAATCTCTTACGAGGAAATTGTACAAGAAGCACAGACAGAAACCTACGAAGAAGAACAAACCATCTATATCGACAACGCTGTCTATAAAGAGTGGAAAGATGAAAATGGTAAAGTTGAATTTTATCTCAAAAATGGCTTTTTATATGCTCCTCTGTCACGAGACCGCTATCCATCTGTTCTGACTGGTAACGAAACACGAGATAACTGGATTCGAAAAGACATGGAAGTCGAGACTGACAGTCAAGATGTCTTGATATCAACTGCTTTAAAAGATTTAAAAGCACACGCTTATCCAGCAATTACCTATGAAGTTGATGGATATGTTGATTTAGAACTTGGTGACGCTGTTAGAATTCAAGATGATGGATACGAGCCACCACTAATTCTCACAGCGAGGGTTATTGAGCAAGAAATATCCAGAACAAATCCCAATTCTAACAAAACTAAATTCAGTAATTTTGTCGAGAAAAAAAGTCAGTTAGCTTCTGATTTAATTAGTGATATGCTACGTCTTTACGACGAATCAATTCCATACGATATACAACTAGCGACTTCAAACGGAGTTGCTTTTAAAAATGGAGTTGGTGAATCTGTATTAACGCCTAGCCTGCAAAAAAATGGGAAAGATTACGATGCTATTTATTTTTACAAGAACGGTGACTCACTGATTGATATAGGTCCTTCGCTGACAGTTAAAGCAAGCGACTTTAGCCATGTCTTAAACGTAACGGTCGAAGCTTATGTTAACGACGAAAAAGTAGCAAGTAAACAAATATCATTTACTGATACTGAAGATGGGACTGATGGAAAAGACGGGTTGCCAGGTCCGCAAGGTCCACCAGGAATAGATGGTTTACAAGGTCCGAGAGGAGAACAGGGTATTCCTGGTCCGGCTGGTGCTGACGGAAAGGCAACGTACACACACATTGCTTACGCCCTTGACGAAACCGGAACTACTGGTTTTAGCGTATCTGATAATACTGGCAAAACATACATAGGTATGTATGTTGATGATAATATCATTGACTCAAACGACCCTAAAAAGTACAAGTGGAATTTGATAAAAGGCGCAGATGGTGCAAGAGGTATTCAAGGTCCGGCTGGAGCAGATGGTAAAACGCCTTATTGGCATGTAGCGTATGCAAATAGCTCTGACGGTAAAACTGATTTTAGTGTAACCGATAGCCTTAATAAACGCTATATAGGGCAATACACAGACTATATCGCTATTGACTCGAGCGATCCAACAAAATACCGTTGGACTGATATGGTCGGAACAGTCTTTGTTGGCACAAATAATCTGATTGACGGTACAAAATTATTTGTTGGTTCTGATTGGTTTACTTCTGCAACACTAGAAGATGAAAATATCTCTAATTATCCATTTACATTTAAAAAATGGATAAGCGGCCAAAAGGTATCACACGCAAAAGACATTATAGTTGAGCAAGGTGTGACATACACTTTTAGCGCTTATGTTAAACGTGAGGTAGCTGGGAATTTATATTTTTATCTCTATGATATAGCAGATGGTTTTATTACTAGTGACACTCCACGAGAAACAATTATAAAAAATGTTGACTCGAATGTCAGACGTTTTGAAATCACCTTTACACCAACTAAGACAGGTAAGATTAGACCACGGTTTGCGATGGTGTCATCGGAACAAGGTAGTTTTAGTACTGGTGGCTTTATGCTTGTCAGAGGTAACAAGACAGGCGATTGGCAGGAATCTGAATCTGATAAAGCAAGTAATCTTGATTCAAAAGCCGATGGTGCTTTTACTGTTGAACAGTTAAACGCTATCGCAGAAGAACAGCGTTTGATGAAAGCTAACCTTGAAGCTACTGCAAGTTTGCAAGAAGTACAAGATAAAGCAAAAGAGTTGCTTGATCAAATCAAAAAAATAGAAGATGGTCAAAAAGTATCAGAACAAACTATGGTATCTAACGCTAATAGAGTTGTTCAGATACTGGCTAAGTTGGATGATGTACAATTAGTAACAGAAGCCATTACGCAGTATATGTCATACTCTGATGATGGTCTAGTTATCAAAATGAAAGACGGAACGTCAAGCGTACGTGTGACGACTGACCGCATTAGTTTTTACTCTGGTGGCACAGAGACTGCCTTTATCAGCCAAGGATTTTTACAAATCGAGTCTGGTGTTTTCACTTTGAGGCTTCGTATTGGAAGCTTTTTGTTTGAAGAAAGCTCGAAAGGTCGTTTACAAATCAAGAAAATTAGAGGGATTGGAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
957867234d0bb2ef24db4a7b700d6fe1de6bdf6ec950e0308d414d2195ed80f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank