Protein

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Genbank accession
QBP05869.1 [GenBank]
Protein name
baseplate wedge tail fiber connector
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MNVKIYADTSTGFLHFDGSRISPKPLNGVIVASASNKAFRIRITRSDLLQANGNPRVMFKHLKMNRVARQDGTNLRLDLGYSRQQIIDYINAEAQKVVETGIEGVAVCIDGTVVSYAATTIDFTGSAVQSLEVTGGIATISIAQTTAVGGGSSYADSDVDTHLNVGLANTGDILTWGGSDYEWSAPSTIGAGNPVVNGSITGVGNSTLRLVLQDSNVIDIDLSTLNTTGSDDDINTRITKAVSFARTETTYLRYSVGSASNNMWDAAFRTPGSTPLGMGSAADTHVSNDGNAQPFAQTLIFRNAGINTDRDSVLVGVTDGDEADIMVPGIIHHYIGISSTKKLVHHWGEPHVLGIGTTQANRAELMDVSDDKFYGIFMDFDGQRFGTGVSTSQLNSQFRYKVVDLSSGDVTDLTPNWTHYGKSQDGNGDSRVYSRLMYGALAGTNNNNVSSASNVHLRFEGDIAQATSITYQQGAVLLDDTQVSLMVRNPEKYLRDYKVGTSSRRPYFDTTQLFKVSFANYHFQAAQVWLMGDGDYDSLGSSSEQGVRNFVRPDAYMRLNWPSYPSYTGFTTVSVTAGPSFTNTKSTNFENLDHATRNRQSGEFTNLIKTSGQTASAYTLSFWFRPGNNSHEDQNIFNAFSQYNTFEGTSIIQVMYNGNTASTRNIRFKVQDQSGGLDADNYRLDLATPVGDVTHTNGSNGFHHIAITCDGSANAYTSASLGIKIYINGVLQTLTDNSNGGGIEDVPSGGETFSIAPNKIALGRQPTNARYMRDSKVDELSFFNTELNATEVACLYNGGTPSNLANFIPGPAHWYRMGDGDSAPTLADSIGNADLSMTNMSDANFVTIVPS
Physico‐chemical
properties
protein length:851 AA
molecular weight: 91823,13630 Da
isoelectric point:5,14156
aromaticity:0,09048
hydropathy:-0,32045

Domains

Domains [InterPro]
DC_1726
STR
34–570
DC_1726 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
568–797
G3DSA:2.60.120.200
IPR013320
STR
613–799
IPR013320
PF13385
LEC
614–793
PF13385
QBP05869.1
1 851
Architecture
STR
STR 34-799 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBP05869.1
1 851
Domain Start End Length (AA) Confidence
N-terminal 1 454 454 0,2482
Central domain 455 653 200 0,3321
C-terminal 654 851 197 0,9026
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-454
Central
455-653
C-terminal
654-851

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H68
[NCBI] 		2545436 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBP05869.1 [NCBI]
Genbank nucleotide accession
MK016663 [NCBI]
CDS location
range 16746 -> 19301
strand +
CDS
ATGAACGTTAAGATTTACGCAGATACAAGTACTGGATTCCTCCACTTTGATGGTAGTAGAATCTCACCCAAACCACTGAATGGTGTTATTGTAGCTTCTGCATCTAATAAAGCATTTAGAATTAGAATCACGAGAAGTGACCTTCTTCAAGCGAATGGTAACCCTAGGGTTATGTTCAAGCACCTGAAGATGAATAGGGTTGCAAGACAAGATGGTACAAACCTTCGACTTGATCTTGGATATAGTAGACAACAGATCATTGACTATATCAATGCTGAAGCACAGAAGGTTGTTGAGACTGGTATTGAAGGTGTTGCAGTATGTATTGATGGTACTGTTGTATCTTATGCTGCAACTACAATTGACTTTACTGGTAGTGCAGTTCAATCTCTTGAGGTAACTGGTGGTATTGCTACGATTTCTATTGCACAAACCACTGCTGTTGGTGGTGGTAGTTCATATGCAGATAGTGATGTAGATACTCATCTCAATGTTGGTCTTGCAAACACTGGTGATATTCTTACTTGGGGTGGTTCTGACTATGAGTGGAGTGCTCCTTCCACTATTGGAGCAGGTAATCCTGTAGTTAATGGTTCTATCACTGGTGTAGGTAACAGTACTCTACGTCTCGTACTACAAGATTCTAATGTTATTGATATTGATTTAAGTACTCTGAACACCACTGGTTCTGATGATGACATCAACACTAGGATTACCAAGGCAGTATCTTTTGCAAGAACTGAAACCACTTACTTGAGATATTCAGTAGGTAGTGCATCCAATAATATGTGGGATGCTGCATTCAGGACACCTGGTAGCACTCCATTGGGTATGGGATCAGCAGCAGATACTCATGTTTCTAATGATGGTAATGCACAACCCTTCGCACAAACTCTTATCTTCAGAAACGCAGGTATCAATACTGATAGAGACAGTGTTCTAGTTGGAGTTACTGATGGTGATGAAGCGGATATCATGGTTCCTGGTATAATTCATCATTATATTGGTATTAGTTCTACCAAGAAACTTGTTCATCACTGGGGTGAACCACATGTCCTAGGTATTGGCACTACTCAGGCTAACAGAGCAGAGTTGATGGATGTAAGTGATGATAAATTCTATGGTATCTTTATGGACTTTGATGGACAGAGATTTGGTACTGGTGTTTCCACATCTCAACTGAATAGTCAGTTTAGATATAAAGTGGTTGATCTTTCAAGTGGAGATGTTACTGACTTAACACCAAACTGGACACACTATGGTAAGAGTCAGGATGGTAATGGTGATTCGCGAGTGTATTCAAGATTAATGTATGGTGCTCTTGCTGGTACAAATAATAATAATGTATCATCAGCATCAAATGTACATTTAAGATTTGAGGGTGATATTGCACAGGCAACTAGTATAACCTATCAACAGGGAGCAGTTTTGCTTGATGATACACAGGTAAGTTTGATGGTTCGTAACCCCGAGAAGTATCTCAGAGACTATAAGGTTGGTACTTCATCTAGAAGACCTTACTTTGATACTACTCAACTCTTCAAAGTGAGTTTTGCAAACTACCATTTCCAAGCAGCACAAGTTTGGCTAATGGGTGATGGTGATTATGATTCACTTGGTTCTTCTAGTGAACAGGGTGTCAGAAATTTTGTAAGACCAGACGCATATATGAGACTGAATTGGCCCAGTTATCCATCTTATACTGGATTCACAACTGTGAGTGTTACCGCTGGTCCTTCCTTTACGAATACAAAATCAACTAATTTTGAGAACCTGGATCATGCTACCAGGAATCGTCAAAGTGGTGAGTTCACTAACTTGATTAAGACATCTGGTCAGACGGCATCTGCATACACTCTGAGTTTCTGGTTCAGACCAGGTAACAACTCTCATGAGGATCAAAACATCTTTAACGCTTTTAGTCAATACAATACATTTGAGGGTACAAGTATCATCCAAGTGATGTACAATGGTAATACAGCATCAACTAGAAACATTAGATTCAAGGTTCAGGATCAGTCTGGTGGACTTGATGCAGATAATTACAGACTTGACTTAGCTACACCTGTTGGTGATGTGACTCACACCAATGGTAGTAATGGTTTCCATCATATTGCTATCACCTGTGATGGTTCTGCTAATGCATATACATCAGCAAGTCTTGGCATCAAGATCTATATCAATGGTGTACTCCAAACACTGACTGATAATAGTAATGGTGGTGGTATTGAAGATGTTCCATCTGGTGGTGAGACTTTCTCTATTGCTCCAAATAAAATTGCACTTGGAAGACAACCAACCAATGCAAGATATATGAGAGATTCAAAGGTTGATGAACTCTCATTCTTCAATACAGAACTCAATGCAACTGAAGTCGCTTGTCTGTATAATGGTGGTACTCCATCCAATCTTGCTAACTTCATTCCAGGACCAGCACACTGGTACAGAATGGGTGATGGTGATTCAGCACCAACTCTTGCAGATAGTATCGGTAACGCAGACCTGTCTATGACGAATATGTCTGACGCCAACTTTGTGACTATAGTTCCTTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
642b2c99fbbff694912bcd69e76581d19dfa3ccb0465e43556641ae47c4996c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Cyanophage S-LB68 from the Huang Bohai Liu,X. 2020-10 — GenBank