Protein

View in Explore
Genbank accession
UPW37897.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MTQTTGEKEGVFYGYSLYDLNKEKLITFDELLTGIRGEPGENGDIGPKGDQGPVGPQGIQGETGAQGIQGIQGLKGDKGDQGIQGLKGDKGDQGIQGVPGTQGPQGIQGLKGDKGDQGIQGETGAQGIQGIQGVPGAKGDIGPVGPAGLTWKGSWNIATAYAVNEAVGHDGSLYFATAESTGQTPSLGSDYWEVLATEGPEGRQGVMGPQGPQGIQGPQGIQGPKGDTGETGLQGLKGDKGETGLTGPQGLQGPKGDTGETGPQGLQGPKGDTGDKGETGLTGPQGIRGIQGIAGVQGPKGDKGDKGDTGATGPAYEYKKVSRFGMPAAGISISTPLFNSGLTINVVGVKTDTFRFTLTNTGSESRTIDGELIYFDPDGAIKRFVVNFSIAAGATTNFGSYTYAITTPRVFTLNFNATGTIQHAHEVKYFVIGRSSYTENTSAGATVTIEKLYN
Physico‐chemical
properties
protein length:454 AA
molecular weight: 46423,58520 Da
isoelectric point:4,89545
aromaticity:0,06828
hydropathy:-0,52445

Domains

Domains [InterPro]
DC_1939
ATT
1–45
DC_1939 DC_0329 DC_1819 DC_2214
IPR018247
Unmapped
19–31
IPR018247 IPR050149
IPR008160
STR
90–146
IPR008160 IPR008160
DC_0656
STR
237–292
DC_0656
UPW37897.1
1 454
Architecture
ATT
ATT
STR
RBD
ATT 1-45 | ATT 61-125 | STR 126-292 | RBD 310-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO10
[NCBI] 		2918865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37897.1 [NCBI]
Genbank nucleotide accession
OM386655.1 [NCBI]
CDS location
range 95523 -> 96887
strand +
CDS
ATGACACAAACTACAGGTGAAAAAGAAGGTGTATTTTACGGTTATTCTCTTTATGATTTGAATAAAGAAAAACTAATAACTTTTGATGAATTACTTACGGGTATTCGAGGAGAGCCTGGAGAAAATGGCGATATTGGACCAAAAGGTGACCAAGGTCCTGTGGGACCCCAAGGTATTCAAGGGGAAACAGGGGCCCAAGGTATTCAGGGTATTCAAGGTCTAAAAGGTGATAAGGGTGACCAAGGTATTCAAGGACTAAAAGGAGATAAAGGCGACCAAGGTATTCAAGGAGTTCCTGGAACTCAGGGTCCACAGGGTATTCAAGGTCTAAAAGGTGATAAGGGTGACCAAGGTATTCAAGGGGAAACAGGGGCCCAAGGTATTCAGGGTATTCAAGGAGTTCCAGGTGCCAAAGGAGATATAGGCCCAGTCGGTCCGGCAGGTTTAACATGGAAAGGTTCTTGGAATATTGCAACTGCTTACGCAGTTAACGAAGCCGTTGGACACGATGGAAGCCTATATTTCGCCACAGCTGAAAGCACCGGACAAACTCCTTCATTAGGTAGCGATTACTGGGAAGTCTTAGCAACGGAAGGGCCTGAAGGTCGGCAGGGTGTCATGGGTCCGCAAGGACCACAAGGTATTCAAGGACCACAAGGTATTCAAGGTCCTAAAGGTGATACAGGCGAAACTGGACTACAAGGTCTTAAAGGCGACAAAGGAGAGACAGGTTTAACCGGGCCACAAGGACTACAAGGACCTAAAGGTGATACTGGTGAAACCGGTCCACAAGGACTACAAGGGCCTAAAGGTGATACGGGTGACAAAGGAGAGACAGGTTTAACCGGACCACAAGGTATTCGTGGTATTCAAGGTATTGCTGGAGTCCAAGGACCTAAAGGTGATAAGGGTGACAAAGGAGATACAGGTGCCACTGGTCCAGCCTACGAGTATAAAAAAGTATCTAGATTTGGAATGCCTGCCGCGGGTATATCAATTTCTACTCCTTTATTCAATTCAGGATTAACAATAAATGTGGTAGGCGTCAAAACTGATACATTTAGATTTACCCTTACTAATACAGGTTCAGAGTCTAGAACTATTGATGGTGAACTAATTTATTTTGACCCGGATGGTGCAATAAAAAGATTTGTTGTTAATTTTTCAATAGCTGCAGGTGCGACAACCAATTTCGGTTCGTACACGTATGCAATTACAACTCCCAGAGTTTTTACTTTAAATTTTAATGCTACTGGGACTATACAACACGCCCACGAAGTAAAATATTTTGTAATAGGACGCTCTAGTTATACGGAAAATACTTCTGCTGGTGCTACTGTTACTATTGAAAAACTCTATAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93b00115931d6ee802df80cb801d05a9efdc408670633325b7f089f5b0c36c74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank