Protein

View in Explore
Genbank accession
XRX10847.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MADAILSDPIAPRTSTYTTPSAMGPPGPGVELSGAVATYADLPSSLGGSDAGKAYIVQGNGKLYVWSGTAWPAEPNGADFRGPTGPVGATGPTGAQGPKGDQGPKGDVGAQGVQGPGFRYRGDYADGVTYQPGDVVRSGGSAFVTTTGGIGTGIFEALVLKGDQGIQGVQGVQGPKGDQGIQGATGAKGDTGATGAKGDTGSQGPQGVKGDTGATGPQGLQGPQGVVGPQGPKGDTGATGPQGAGLQIDGTVATYSALPTGVADGKNYLTADTGKYYQRSGGAWPAETDGVTLRGPQGATGATGPKGDTGATGAQGIQGPQGLQGVKGDTGAQGIQGVKGDTGAQGPQGVKGDTGTTGAKGDTGAQGIQGIQGPQGPKGDTGASGTTLFRVKTAAQWTSDNTVLAAGECGIESDTSLAKRGNGSTAWNSLPYGIASRPWSRAIITAGTVLTQAATESPATMGAVLTAQTTGPGHAFASDGITVPAGAYLCRLTGTWSATNSAIRGFGVYDGSEYLVNGSGQLALRHVVTQLVIVSAPTKLQPAYIADTSTASARTLSSTAVTAFTVQAV
Physico‐chemical
properties
protein length:569 AA
molecular weight: 55601,38570 Da
isoelectric point:5,54336
aromaticity:0,05448
hydropathy:-0,29121

Domains

Domains [InterPro]
IPR050149
Unmapped
24–385
IPR050149 SSF69349 DC_1982
DC_2298
STR
30–147
DC_2298 IPR008160 IPR008160 G3DSA:1.20.5.320
DC_1453
STR
122–214
DC_1453 DC_0435
DC_1340
STR
212–334
DC_1340
XRX10847.1
1 569
Architecture
STR
STR
ATT
STR
RBD
STR 30-349 | STR 355-380 | ATT 381-430 | STR 431-510 | RBD 511-569
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage RanchParmCat
[NCBI] 		3399737 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRX10847.1 [NCBI]
Genbank nucleotide accession
PQ868985.1 [NCBI]
CDS location
range 22019 -> 23728
strand +
CDS
ATGGCCGACGCAATCCTCAGCGATCCGATCGCCCCGCGTACATCGACGTACACCACACCGAGCGCCATGGGGCCTCCTGGGCCCGGTGTGGAGCTGTCTGGCGCAGTTGCTACGTACGCGGATCTGCCGTCGTCCCTGGGCGGCTCAGACGCCGGCAAGGCGTACATCGTGCAGGGCAACGGCAAGCTGTACGTCTGGAGTGGGACAGCCTGGCCGGCCGAGCCCAACGGTGCTGACTTCCGAGGTCCTACCGGTCCGGTCGGTGCGACCGGTCCGACAGGTGCGCAGGGTCCCAAGGGCGATCAGGGTCCGAAGGGCGATGTCGGCGCACAGGGTGTGCAGGGTCCGGGCTTTCGGTATCGCGGTGATTACGCCGACGGGGTGACGTATCAGCCGGGCGATGTCGTGCGCTCGGGTGGGTCTGCATTCGTTACGACGACCGGGGGCATCGGCACAGGGATCTTCGAGGCCCTCGTGCTCAAGGGCGACCAGGGCATCCAGGGTGTCCAGGGTGTCCAGGGTCCGAAGGGCGACCAGGGCATCCAGGGTGCTACAGGCGCGAAGGGCGATACCGGCGCGACTGGAGCCAAGGGTGATACGGGATCCCAGGGGCCTCAGGGAGTCAAGGGCGATACCGGTGCGACAGGACCTCAGGGCTTGCAGGGTCCCCAGGGTGTCGTCGGTCCTCAGGGTCCGAAGGGTGACACAGGAGCGACGGGTCCGCAGGGTGCCGGCTTGCAGATCGACGGGACAGTCGCCACCTACAGCGCGCTTCCGACGGGTGTCGCAGACGGCAAGAACTACCTGACCGCTGACACGGGCAAGTACTACCAGCGATCAGGTGGCGCATGGCCGGCGGAGACTGATGGCGTGACGCTGCGCGGACCTCAAGGTGCGACAGGTGCCACCGGGCCCAAGGGCGACACAGGAGCCACGGGTGCGCAGGGCATCCAGGGACCTCAGGGCTTGCAGGGTGTGAAAGGCGACACCGGTGCGCAGGGCATCCAGGGAGTCAAGGGTGACACCGGAGCCCAGGGTCCCCAGGGTGTGAAGGGCGATACGGGTACGACCGGCGCGAAGGGTGACACGGGTGCTCAGGGCATCCAGGGCATCCAGGGTCCACAGGGGCCCAAGGGTGATACGGGTGCATCGGGCACGACGCTGTTTCGCGTCAAGACTGCGGCGCAGTGGACGAGCGACAACACCGTGCTCGCTGCCGGCGAGTGCGGGATCGAGTCTGACACGAGCCTCGCGAAGCGCGGCAACGGGTCGACTGCGTGGAACAGCCTGCCGTACGGGATCGCGTCTCGTCCCTGGTCGAGGGCGATCATCACGGCCGGCACGGTGCTCACTCAGGCGGCCACCGAATCGCCTGCAACGATGGGCGCAGTGCTGACAGCGCAGACGACGGGGCCCGGGCACGCATTCGCGTCTGACGGGATCACGGTGCCTGCGGGCGCGTACCTCTGTCGACTGACCGGCACCTGGTCAGCGACGAACTCAGCGATCCGTGGCTTCGGTGTGTATGACGGGTCGGAGTACCTGGTGAACGGCTCAGGTCAGCTCGCACTGAGGCACGTCGTGACGCAGCTCGTGATTGTGAGTGCGCCGACCAAGCTGCAGCCCGCATACATCGCAGACACGTCGACGGCATCAGCGCGCACGCTGTCGAGCACGGCCGTGACAGCCTTCACGGTGCAGGCCGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
df2e4e86e18401ce9e650a762304f81fef9f1aa1928338eb0803f74fd9986269
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50