Protein

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Genbank accession
XUU32467.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MTNRLNYPEYWAQDGEALDPDLDTTAPSYIPDRYENVGWEAEKPPEQWQNFLTQITDVKIRDMLVGGILQWCDTVTYSLGAFAIVDGKIYQKREEIPGNISPPTSGSGWQEVLETNLVKFNEKVQYLKNVFNAHMAEQNPHKDTVDTIVDGTYLQEYVYDRFASDERVTTIPYHISRTGASVHRVTPEQLGTLPTSGGTFTGPITFTEEAYAGGGVSQYVHRNDSTGIFELVNGTTAIGVDSSGHAWFINSAGAFEIITEANYNKFNIKYGNQFALPVPMLRADFHEDINDAGSVGLWTVETTTAPEFWYGGFNISNNGLKFFGPTFNIPTTVVVVVTTDEVDVVMRTSNEDSFSFPDGLDLKDYIDNKLFADKNVMALRFFEVYPRLSANQISMLARR
Physico‐chemical
properties
protein length:399 AA
molecular weight: 44717,21730 Da
isoelectric point:4,58130
aromaticity:0,12281
hydropathy:-0,33659

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32467.1
1 399
Domain Start End Length (AA) Confidence
N-terminal 1 290 290 0,7285
Central domain 291 388 99 0,6570
C-terminal 389 399 10 0,8401
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-290
Central
291-388
C-terminal
389-399

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shi_2KOFFS
[NCBI] 		3423637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32467.1 [NCBI]
Genbank nucleotide accession
PV615261.1 [NCBI]
CDS location
range 32394 -> 33593
strand +
CDS
ATGACAAATCGTTTGAATTACCCAGAATATTGGGCGCAGGATGGCGAAGCACTTGACCCCGATTTGGATACGACTGCACCATCCTATATCCCAGACCGATACGAAAATGTCGGCTGGGAAGCTGAAAAGCCTCCCGAACAATGGCAGAACTTCTTAACTCAAATCACTGACGTTAAGATTCGAGATATGTTGGTTGGTGGGATATTGCAATGGTGTGATACCGTAACATATTCGCTTGGCGCTTTTGCAATAGTTGATGGTAAGATTTATCAGAAGCGGGAAGAGATTCCTGGCAATATAAGTCCTCCAACCTCCGGAAGTGGTTGGCAAGAGGTTCTTGAGACAAACCTTGTTAAGTTTAATGAAAAGGTTCAATATCTCAAGAATGTGTTCAATGCTCATATGGCAGAACAGAACCCTCATAAAGATACTGTAGACACAATTGTTGATGGGACATACCTTCAAGAATATGTGTACGACAGATTCGCCAGCGACGAACGAGTTACAACAATCCCATATCACATCTCCAGAACCGGCGCATCTGTCCACAGAGTAACTCCAGAACAGCTTGGAACACTTCCAACATCTGGTGGGACTTTCACAGGACCGATAACTTTCACCGAAGAAGCATATGCTGGTGGCGGTGTTTCACAATATGTACACCGAAATGATTCGACTGGCATATTCGAATTGGTTAATGGGACTACTGCAATTGGTGTGGACAGTAGTGGTCATGCGTGGTTCATAAACTCCGCCGGTGCTTTTGAAATCATTACGGAAGCAAACTACAACAAGTTCAACATTAAGTATGGGAACCAGTTTGCACTCCCTGTTCCAATGCTTCGTGCTGACTTTCATGAAGACATTAATGACGCAGGGTCTGTTGGTCTGTGGACCGTTGAGACAACCACTGCCCCAGAATTTTGGTATGGCGGATTTAACATCTCCAACAATGGGTTGAAGTTCTTTGGACCAACCTTCAATATCCCGACCACTGTGGTTGTTGTAGTTACTACCGATGAAGTTGATGTAGTTATGCGAACTTCTAATGAAGATTCTTTCAGCTTTCCAGACGGACTTGACCTGAAAGACTACATTGATAACAAACTCTTTGCAGATAAGAATGTAATGGCTCTAAGATTCTTTGAGGTATATCCAAGACTTTCTGCTAACCAAATCTCTATGCTTGCGAGACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
74adff93e943d5570a927b336a0a19c8ffbb5aa86fdf696ead0b970d6bb4cdbf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8600
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50