Protein

View in Explore
Genbank accession
AOO19381.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MSKLSVSGLSGITETLNQITIPAGNILDVEGHVLNTSTTAFQLPAGTTAQRPGSASAGYMRWNTSDLKIEIYNGSSWTQYTVEGTGGTVSTLGQTSATAATSAAAILAANPGAPDGVYWINHGSGAYQTYCLMEAGGFMLVGKIPASPATSPANPWSYNGARWSQQTTTNESGCQSIAGGDSLNRGYYGYTLTEGFIFAMGDYRNWLYPKSIPRTGVTARNAFIGGQVNITSVDRENFLSWIGNTGNSRNDWDNQPYCNRIGFNRTDSSAAAMRFGITMNNENECNSNDSAIGFGCYTNNDTSGDRNCAAGGFRWNGTVRYPKDGWIFVK
Physico‐chemical
properties
protein length:330 AA
molecular weight: 35280,42070 Da
isoelectric point:5,72865
aromaticity:0,10909
hydropathy:-0,38273

Domains

Domains [InterPro]
DC_0522
ATT
1–204
DC_0522
G3DSA:2.60.120.1000
STR
86–181
G3DSA:2.60.120.1000 DC_0901
AOO19381.1
1 330
Architecture
ATT
STR
ATT 1-204 | STR 205-330
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOO19381.1
1 330
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,0592
Central domain 159 319 162 0,2053
C-terminal 320 330 10 0,9592
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-319
C-terminal
320-330

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12_WH_07_0310
[NCBI] 		2928624 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus rhodeisland06
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO19381.1 [NCBI]
Genbank nucleotide accession
KX349327 [NCBI]
CDS location
range 27026 -> 28018
strand +
CDS
ATGAGTAAATTATCCGTAAGTGGTTTAAGTGGAATAACCGAAACTCTGAATCAGATAACAATTCCTGCTGGTAATATTTTAGATGTCGAAGGTCATGTACTTAATACAAGTACTACCGCATTTCAGTTACCTGCTGGCACTACTGCACAGAGACCTGGTAGTGCATCTGCTGGATATATGAGGTGGAATACCTCAGATTTGAAGATTGAGATTTATAATGGATCGAGTTGGACTCAATATACGGTTGAAGGTACTGGTGGTACAGTATCTACCTTAGGTCAAACTTCTGCAACTGCTGCAACTTCTGCTGCTGCTATTCTTGCTGCAAATCCTGGAGCACCCGATGGTGTTTATTGGATAAATCATGGTAGTGGTGCATATCAAACTTATTGTCTGATGGAAGCAGGAGGATTTATGTTGGTAGGTAAAATTCCTGCATCTCCAGCAACCTCTCCTGCTAATCCTTGGTCGTATAATGGCGCTAGATGGTCACAGCAAACTACCACTAACGAGTCAGGATGTCAAAGCATTGCTGGTGGAGATTCCTTAAATAGAGGGTATTATGGTTATACTTTGACCGAAGGTTTTATCTTTGCGATGGGTGACTATCGTAATTGGTTATATCCTAAATCAATTCCTAGAACAGGTGTTACTGCTAGAAATGCCTTTATTGGAGGACAAGTTAATATAACTTCAGTCGATAGAGAAAACTTTTTAAGTTGGATTGGTAACACTGGTAACAGTAGAAACGACTGGGATAATCAACCCTATTGTAATAGAATTGGTTTTAATCGAACTGATTCTAGTGCTGCTGCTATGAGATTTGGTATTACTATGAACAATGAAAACGAGTGTAACTCCAATGACTCGGCAATTGGATTCGGTTGTTATACTAATAACGATACTAGTGGTGATAGAAACTGTGCTGCTGGCGGATTCCGTTGGAATGGCACTGTTCGCTATCCAAAAGATGGTTGGATTTTTGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb588506896bebec8e4bcbca69fc872e6ef96c8fdb8028b3c73714e973e1343a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50