Protein

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Genbank accession
URG17664.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIQRLGSSLVKMPNGLTLTQWLQPANIIKVDDAPYNGDLIAAYNAVPVTGNYALILTNHTYNAVGLFDAGRNTKPNITIIGAGMPQLADDRSSFVEGSGTIIKGAVKNSAKGFQIGNLGVDCGNTVSRTCYQPARFEDPLQIYGCGANANIFIDNVKCLSAVSVDERPGTHSILLEQTEGVTLGYVECIGGFHGLTIKCRNLRGGIAHCYGQYGDGFIIKSDAGGAASHIYMERIQVGHPDQSMWPDVHLGGIYDAHDGVTIDSVSIGELHVVRGTWGLIPADNATGNITNFHIGHYECHLTYGNYYSLVINNKVVGWTMGTHNITNCSGGIKVDPASVYVNIGTGRSTNNTESGYSLGGNTLIHGELIADANGKYGVEYSGGLGLDVSKIHGLQNSLGTYSGYSSAIQYLLWTDAGFEAMVTGRTVTLRGSLTKGSTAWCGQVLDAVKPTRDIRIYAWAVGLGGSMVPVEAWIRSANGAIDVVGKDSVGEGQIVSFTGSYIFK
Physico‐chemical
properties
protein length:504 AA
molecular weight: 53504,69210 Da
isoelectric point:5,99290
aromaticity:0,08532
hydropathy:-0,01567

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG17664.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9429
Central domain 35 393 360 0,9926
C-terminal 394 504 110 0,9876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-393
C-terminal
394-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp51
[NCBI] 		2948587 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Zindervirus
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG17664.1 [NCBI]
Genbank nucleotide accession
ON526839.1 [NCBI]
CDS location
range 40973 -> 42487
strand -
CDS
ATGATACAAAGATTAGGTTCTTCCTTAGTGAAGATGCCAAATGGTCTTACATTGACACAGTGGTTGCAGCCTGCAAACATCATCAAGGTAGATGATGCACCGTACAATGGAGACCTTATTGCTGCATATAATGCTGTTCCAGTTACAGGCAATTATGCTTTGATTCTTACCAACCACACTTACAATGCAGTTGGCTTGTTCGATGCAGGTCGTAACACGAAGCCTAACATCACCATCATTGGTGCTGGTATGCCTCAACTTGCAGATGATAGGTCGTCATTTGTTGAAGGTTCTGGCACTATCATTAAAGGGGCAGTCAAGAACTCCGCCAAGGGATTCCAGATTGGTAACCTAGGTGTTGATTGTGGTAACACAGTTAGTCGTACATGCTACCAACCCGCACGCTTCGAAGATCCACTACAGATATACGGGTGTGGCGCTAATGCTAACATCTTTATCGATAACGTGAAGTGCCTTAGTGCAGTTTCTGTAGACGAGAGACCAGGAACACACAGCATTCTGCTTGAGCAGACTGAAGGTGTTACTCTCGGATATGTAGAGTGCATTGGTGGCTTCCACGGACTTACCATCAAGTGCCGTAACCTACGTGGCGGGATTGCACATTGCTATGGCCAGTATGGTGATGGCTTCATCATCAAATCTGACGCTGGTGGTGCAGCGAGTCATATCTACATGGAGAGAATTCAGGTAGGACACCCAGATCAGTCTATGTGGCCTGATGTGCACTTGGGTGGTATCTACGATGCGCACGATGGTGTAACCATTGATAGTGTTAGCATTGGTGAGTTGCATGTTGTACGAGGAACTTGGGGTCTGATACCTGCTGATAACGCCACTGGCAATATCACCAACTTCCATATTGGACATTATGAGTGCCACCTTACTTACGGCAACTACTACTCCCTTGTTATCAACAACAAGGTTGTAGGTTGGACTATGGGTACTCACAACATCACGAACTGCTCAGGTGGTATCAAGGTAGACCCTGCATCAGTGTATGTGAACATAGGTACTGGTCGCTCTACAAACAACACTGAAAGTGGGTACTCTCTTGGTGGCAACACCTTGATTCATGGTGAACTGATTGCAGATGCGAATGGTAAGTATGGTGTAGAGTATTCTGGTGGTCTAGGCCTTGATGTAAGTAAGATTCATGGACTACAGAATTCACTTGGTACTTACTCAGGGTACTCTTCTGCTATCCAATACCTACTGTGGACTGACGCTGGGTTTGAAGCGATGGTAACAGGTAGAACTGTGACTTTACGCGGTTCACTCACTAAAGGCTCTACTGCGTGGTGCGGTCAGGTGCTTGATGCTGTTAAGCCTACACGAGACATTCGTATCTACGCATGGGCTGTTGGTCTTGGTGGTTCTATGGTTCCAGTGGAAGCATGGATTCGTTCTGCTAATGGAGCTATAGACGTAGTAGGAAAGGACTCGGTGGGCGAAGGGCAGATTGTTAGCTTCACTGGCAGCTACATATTCAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c415a041519297ffa26e5653c341f6b2ef98b1411c385ff87470011b1d6620e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7731
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cocktail of three virulent phages controls multidrug-resistant Salmonella infection in poultry Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2022-07-06 — GenBank