Protein

View in Explore

Genbank accession

XYH46092.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MAKQNVPLRKPKGSDGEGNIKVPGGPVVLDLGDFDDIFGPMDAESPKNGPLGQFYSGLKDSLGNRFKTKDIVRNFLRSAAPDGLSNVMGFADEAMAATRDIKESIERTNAADLQYIAQRAQKVLPQLKDYVSEDTYNDINQGLENKIEEYDYTVQSGRDQTAIRRARQDESDTNQIKAAMDNIALTDRLNHNKSEQGANARHNQTRAENSIRDVLSTRRFDFVAKSMGMAVDSLQRIVGYKEQVDYGFQRKGLELQFRSYLGIKELVKLSEAHLELNARAYNSMIRNTGIPDHEKRGRNDLTQMGQGSDKRGFASKAIQAVGGKTLSQFYGNYSGDVQSRVQNSLSQKLSMATMAMKMGENGPSLWDNKYSMAGNLAGDYLSDFLINDLVPMLGREARGPLTKLSDRHGGRHNQAGYFLDNMPAFLQEFVNNNQNSRGIKGGIRNLIAPYVPQFGLQDRVQNGTFQTIDQHATFNQATQRSIVDAIPGYLARILQEMRMIRTGSDDVAREVFDMTNGKFGLEKAAHDNLQNRIVPENAVRVASSTINDALNQMDKDGKLSPQARKALGERLLRDGSSNNRFDPEAYIRSRGYAQGTSPEVAKELEEHFRSQFKFDEDGKMSDTSENHKLRQEFSQAFLDIRSISRDPIKEINRLINSGHTEPLRAMGIIVTEKNQDRINYPRIWEILRQGVSDHNPYAEGGSGYDPYAVDNSGTVGHKNFMGPEHPGLGKAFVMNNMRKFRTKYAPEEQAARDATAKHLKALRGRFGSAAKNAQDTFADLTGGKGTDYTPGIKGFSQMMSGGPGFGPQNMAGGYQAFIGEKVNEHKEKLKGYGVDGMQELTDLYSSFDPTQPLIKGIDFGMGDLIDVNTKKIVTKPSDITGEVINRLGQTVVTATEAAAGLLNPKGELAVKVSDTFNSIVDKAIGLHRNINGERSASSEPTDPNNPDELNKQDWSLGPGENPILLARGFMNGEYKDAAGKVINSIADIASDVYDNAGNLVVSAKEFANGLWSKRSGKRYRPTKGFARLLKMAQGAGKYSGTTATGLAFGALKFSAKAALGIAKTAFNFVMDNQNAYLPGEAVPVITRRQLQAGEYYDDKGKVVEDFVDVYSPMYNAQGEAVIAPELYKQLTNFDGSKHALAKNRRIWAKYIMRPLRAVRDAYMRQTKKYYKWLGKTTTRVGGAVGRKLFGGFAKMGGKVFDSMFESVEDPNAKAQIDATLMASQQQTSVMEQVLQAVRDLKPKELRKGSWQAKEASKAAAGDGKKGDGKDDDAKQQGFLKRGLAGLASMLGLGGNKDSDEEDDDGFGLDDAADLADIGDAVGDHRERRRRRRRPGKKGWFGNLWDKAKNSRVGKWGGTILEKAGQSRLGQMAVKPLLQVAKRPTFWAAVATTAAVAGTYLWSSIKDSSGDFRRLRLSQYGIWGMRRELKVLELETLLEQFTDKVSDNPSFSLSGAGAKQMLSIMGLDIENQTEVMNFAKWLELRFKPIYLAWIGGLNKVGQSQVKINEVDDKLPKELKADFLETIRFPYNNESPYSVLINPFDPDDTPEPNMDYISKLFDELKAEFDPERKKDDAKVDGKKVSKEDIAKGAAAAGGAAAVTSDNPAKDIVKKQADEKAKNGDILKTGIAATAATSSSMSGTIAALNARIGNTVTALQAIRMRAYGLQTLQLSDVRSLLALEAVYAKDLTAVDDVVDYSGDDQKLLAAAGTLLGKDTSVGSTDRPKLYNWLMQRFGPTFRAYYGTAKQLNPSADLKTLENKLKGADKVSVGQAVLGAVFRHDQTVWECDSIFDVKGPLADLKRLADADLEHLKKEAEKEVVDSPTQKGSDQMAGKNAADTGGSFTDKVIGKIKDAWDSSKETISNTWNRASEAAKDTYAGAKIAVGMGPDYGEGGASGGVIKSSGTGGEIISGTGGKFEELPYPSANSSIKAAYPTLLAAGKMTGVPVDWLTVIAGIESAFNYTIKAKTSSATGWYQFIDGTWDEMVKKYGPKYGIPGLGQDPERKARKDPRASALMGGEFIKSNYDTVSKGIGRKDLTDTDIYMAHFLGPGGAIKFLKADPNAMAYKIFSKEYSANMSIFFVDAKPSQPRTISAVYKLFQAKMDKFWNTTGKGYRQGEAGQPSNDANADSQTPGAVENSSTADSEAMKNKLKDEAGSKDGLGSDSPDGQPSGDTPIEQGAGTGSIQKLARDTAPMPGAPTSGGGTGSNSSTNATGTDSGSGTADSQQQSQMDAAQSQNNRRAAEVKREREAANAVNDIQSKQLNALYEIRDLQQLQLDNSKDLLKAFSAAQSAGGQGSGNNMNPSTMQGRPAAQRNSSLTLR

Physico‐chemical properties

protein length:	2322 AA
molecular weight:	252857,78710 Da
isoelectric point:	8,81697
aromaticity:	0,07494
hydropathy:	-0,60263

Domains

Domains [InterPro]

DC_0124
STR
1–947

DC_0124 G3DSA:1.10.530.10 DC_0834

DC_0124
STR
911–2110

DC_0124

IPR023346
STR
1934–2059

IPR023346

IPR008258
ENZ
1938–2029

IPR008258

XYH46092.1

1 2322

Architecture

STR

RBD

STR 1-2110 | RBD 2111-2322

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0124	STR	DC_0124	1	947	Novel HMM	DC_0124	Central	Low	Positional only	152 proteins / 152 hits
DC_0124	STR	DC_0124	911	2110	Novel HMM	DC_0124	Central	Low	Positional only	152 proteins / 152 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	1921	2107	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR023346	STR	IPR023346	1934	2059	Merged direct domain	Lysozyme-like domain superfamily	Central	Low	Positional only	29 proteins / 29 hits
IPR008258	ENZ	DC_0010	1938	2029	InterPro cluster	Transglycosylase SLT domain 1	C-terminal	High	Text match	100 proteins / 142 hits
DC_0834	RBD	DC_0834	2110	2322	Novel HMM	DC_0834	C-terminal	Low	Positional only	9 proteins / 9 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pseudomonas phage Viktualia [NCBI]	3395522	Viruses >
Host	Pseudomonas syringae [NCBI]	317	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Genbank protein accession

XYH46092.1 [NCBI]

Genbank nucleotide accession

PV037725.1 [NCBI]

CDS location

range 301125 -> 308093
strand +

CDS

ATGGCTAAACAGAATGTGCCTCTCAGAAAACCGAAAGGTTCTGATGGTGAAGGCAATATTAAAGTACCCGGTGGCCCAGTAGTATTGGACCTCGGTGACTTCGACGACATCTTCGGTCCCATGGACGCTGAATCACCCAAGAACGGTCCACTGGGTCAATTCTACTCTGGGCTCAAAGACTCGCTCGGAAATAGGTTTAAAACGAAAGATATCGTGCGTAACTTCTTACGCTCGGCGGCTCCTGATGGTTTATCTAACGTCATGGGTTTTGCTGACGAAGCTATGGCTGCGACTCGCGATATCAAAGAATCGATTGAGCGTACTAACGCTGCCGATTTACAATACATCGCTCAACGCGCTCAAAAAGTTTTACCTCAGCTTAAAGACTACGTCTCGGAAGACACTTACAACGACATCAACCAAGGTCTAGAGAATAAGATTGAAGAGTATGATTACACCGTTCAATCGGGTCGTGATCAAACTGCAATCCGTCGGGCACGTCAAGACGAATCTGATACCAATCAGATTAAAGCGGCGATGGATAACATCGCACTGACTGACCGTCTTAACCATAACAAGTCTGAACAGGGTGCAAACGCACGTCATAACCAAACACGTGCTGAGAACTCCATTCGTGATGTACTGTCTACTCGACGCTTTGACTTCGTGGCTAAGTCCATGGGTATGGCGGTAGACTCCTTACAGCGGATCGTAGGCTACAAAGAACAAGTTGATTACGGGTTCCAACGTAAAGGTCTGGAACTACAATTCCGTAGTTACTTGGGTATCAAAGAACTGGTTAAGTTATCGGAAGCACACTTAGAGCTTAACGCTCGTGCTTATAACTCGATGATTCGCAACACCGGTATCCCTGATCATGAGAAACGTGGTCGTAATGACCTAACTCAAATGGGTCAAGGTTCGGATAAGCGTGGCTTTGCTTCTAAAGCAATTCAAGCGGTAGGCGGTAAGACCCTCTCCCAGTTCTACGGTAACTATAGTGGTGATGTACAGTCTCGCGTACAGAACTCGCTGAGTCAGAAATTGAGCATGGCTACTATGGCCATGAAGATGGGTGAGAACGGACCTAGCCTATGGGATAACAAATATTCCATGGCTGGTAACCTAGCAGGCGATTACCTGTCTGACTTCCTCATCAATGACCTGGTGCCAATGTTAGGTCGTGAAGCACGTGGTCCTTTGACTAAGCTCTCCGATAGACATGGTGGTCGTCACAACCAAGCTGGCTACTTCCTGGACAACATGCCTGCATTCTTGCAGGAGTTTGTGAATAACAACCAGAACTCTCGTGGTATCAAAGGTGGCATTCGAAATCTGATAGCGCCTTATGTCCCACAATTTGGTTTGCAGGATCGTGTTCAGAACGGAACGTTCCAAACAATTGACCAGCATGCGACGTTTAACCAAGCAACCCAACGTAGTATCGTTGATGCGATCCCCGGTTATCTTGCCCGTATACTGCAAGAGATGCGCATGATCCGTACTGGTAGTGATGATGTAGCACGTGAAGTGTTCGACATGACTAACGGTAAGTTTGGCCTTGAGAAAGCTGCGCATGATAACTTGCAGAACCGTATTGTTCCTGAGAACGCAGTTAGAGTAGCCTCGTCTACTATTAACGATGCACTCAATCAAATGGATAAAGATGGTAAGTTGAGTCCACAGGCACGTAAAGCCCTGGGTGAACGCTTATTACGCGATGGTTCGTCTAACAACCGCTTCGATCCAGAAGCCTACATCCGCTCGCGTGGCTATGCACAAGGTACAAGTCCTGAAGTAGCTAAGGAATTGGAAGAACACTTCCGTAGTCAGTTCAAGTTCGATGAAGACGGTAAGATGTCTGACACGTCCGAGAACCATAAACTGCGCCAAGAGTTCTCTCAAGCATTCTTGGATATCCGTAGTATCTCTCGTGACCCAATCAAAGAGATCAACCGGTTGATTAACTCTGGTCACACTGAACCATTGCGTGCAATGGGTATCATTGTTACTGAGAAAAATCAGGATCGGATTAACTATCCACGTATCTGGGAAATCCTTCGTCAAGGTGTGAGCGATCACAACCCGTATGCTGAGGGTGGTAGTGGTTATGATCCATATGCAGTAGACAACTCGGGTACCGTGGGGCATAAGAACTTCATGGGTCCTGAACACCCAGGCTTAGGCAAAGCGTTCGTTATGAACAACATGCGTAAGTTCCGAACCAAGTATGCTCCTGAAGAGCAAGCTGCTCGCGATGCCACAGCTAAGCACCTTAAGGCCCTACGTGGTCGTTTCGGTAGTGCTGCTAAAAACGCCCAGGATACGTTTGCTGACCTCACAGGCGGTAAGGGTACTGACTATACTCCGGGTATTAAAGGCTTCTCCCAGATGATGTCTGGAGGGCCAGGATTTGGTCCGCAGAACATGGCGGGGGGTTATCAGGCGTTTATCGGTGAGAAAGTCAATGAGCACAAAGAAAAGCTGAAAGGTTATGGTGTAGATGGGATGCAGGAACTGACGGACTTGTACAGTTCGTTTGATCCAACGCAACCTTTGATCAAGGGTATTGACTTCGGCATGGGCGACCTGATCGACGTTAACACCAAGAAGATCGTAACTAAACCATCTGACATTACAGGCGAAGTCATCAACCGGCTAGGTCAGACTGTAGTAACGGCAACCGAAGCTGCCGCAGGTCTACTCAACCCTAAAGGTGAGTTAGCGGTTAAAGTAAGCGATACTTTTAATAGCATCGTTGATAAAGCGATCGGCCTCCATCGTAACATTAATGGTGAGCGATCGGCGAGCAGTGAACCTACCGATCCTAATAATCCTGACGAACTCAATAAGCAAGACTGGTCTTTAGGTCCTGGTGAGAATCCAATCCTTCTGGCTCGTGGCTTTATGAACGGGGAGTATAAGGATGCTGCTGGTAAGGTAATCAACTCTATCGCTGATATTGCATCTGACGTTTACGATAACGCCGGTAACTTGGTAGTGTCGGCTAAAGAGTTCGCTAACGGCCTGTGGTCTAAACGTAGTGGTAAACGCTATCGTCCAACTAAAGGCTTTGCACGACTACTCAAAATGGCCCAGGGCGCAGGTAAGTACTCTGGTACAACCGCAACTGGTTTGGCTTTCGGTGCATTGAAGTTCTCAGCTAAGGCTGCATTGGGTATTGCCAAAACGGCATTCAACTTCGTTATGGATAACCAGAACGCTTACCTACCGGGTGAGGCGGTTCCAGTTATTACACGTCGTCAATTGCAGGCAGGTGAATACTACGACGATAAAGGTAAAGTTGTTGAAGACTTTGTCGACGTATACTCACCGATGTATAATGCTCAAGGTGAGGCTGTTATTGCACCAGAGCTGTACAAGCAACTAACTAACTTCGATGGTTCCAAACACGCCCTGGCTAAGAACCGTCGCATCTGGGCTAAGTACATCATGCGCCCACTTCGGGCCGTGCGTGATGCTTACATGCGTCAGACCAAGAAGTACTACAAGTGGTTAGGTAAAACGACTACTCGTGTTGGTGGTGCTGTCGGCCGTAAGTTGTTTGGTGGATTCGCTAAGATGGGCGGTAAGGTATTTGACTCGATGTTTGAATCAGTCGAGGACCCAAATGCTAAAGCTCAGATTGACGCCACCTTAATGGCTTCACAGCAACAGACTTCTGTAATGGAACAAGTGTTGCAAGCTGTACGTGACCTTAAGCCGAAAGAACTCCGTAAAGGTAGTTGGCAGGCCAAGGAAGCGAGTAAGGCTGCTGCCGGTGACGGTAAGAAAGGCGATGGTAAGGATGATGACGCCAAGCAACAAGGTTTCCTCAAGCGTGGCCTAGCTGGGTTGGCTTCGATGTTAGGTCTTGGTGGTAATAAAGACTCCGACGAGGAAGACGATGATGGTTTCGGCTTAGACGATGCTGCGGATCTTGCTGACATCGGTGACGCCGTTGGTGATCACAGAGAGCGTAGACGCCGTCGTCGACGTCCAGGTAAGAAAGGTTGGTTTGGTAATCTATGGGACAAGGCTAAGAACTCCCGTGTTGGTAAATGGGGTGGTACTATCCTTGAAAAGGCGGGGCAATCACGTCTGGGCCAAATGGCGGTTAAGCCATTACTCCAAGTAGCTAAACGTCCTACCTTCTGGGCCGCTGTGGCAACTACGGCTGCTGTAGCAGGTACTTACTTGTGGTCGAGTATCAAAGACTCATCTGGTGACTTCCGACGTCTCCGGTTATCGCAATACGGTATTTGGGGCATGCGTCGTGAACTCAAGGTACTCGAGCTTGAGACGTTGTTAGAGCAATTCACCGATAAGGTATCTGACAACCCATCGTTTAGTCTGAGTGGTGCTGGCGCTAAGCAAATGCTTTCGATCATGGGTCTTGATATTGAGAACCAGACTGAGGTGATGAACTTTGCTAAGTGGCTTGAACTACGTTTCAAACCAATCTACCTTGCGTGGATTGGTGGGTTAAACAAAGTGGGTCAAAGCCAAGTTAAAATTAATGAGGTTGATGACAAGCTACCTAAAGAACTCAAAGCCGACTTCCTTGAAACCATCCGATTCCCGTACAACAACGAATCACCTTACTCGGTTCTGATCAACCCGTTTGATCCAGATGACACTCCTGAACCTAACATGGATTATATCTCCAAGTTGTTCGATGAACTCAAAGCCGAGTTTGATCCTGAACGTAAGAAGGATGACGCCAAAGTAGATGGTAAGAAGGTATCCAAAGAAGATATCGCCAAAGGTGCTGCCGCGGCAGGTGGTGCAGCTGCTGTTACTAGTGATAACCCAGCTAAAGACATCGTTAAGAAACAAGCCGATGAAAAGGCTAAGAATGGCGATATTCTTAAAACTGGTATTGCTGCTACAGCGGCTACCTCGTCGAGCATGTCGGGTACGATTGCTGCATTGAACGCACGTATTGGTAACACCGTAACGGCGCTCCAAGCGATTCGTATGCGGGCGTACGGTCTTCAAACACTGCAACTGTCCGATGTACGTAGTCTGCTGGCCTTAGAAGCAGTTTACGCCAAAGACCTTACCGCGGTGGATGATGTTGTTGACTACTCAGGTGACGATCAGAAGCTGTTAGCAGCGGCTGGTACATTACTGGGTAAAGACACATCTGTTGGTTCCACCGATCGACCAAAGTTGTATAACTGGTTGATGCAACGATTTGGTCCCACCTTCCGTGCTTACTACGGTACAGCGAAACAATTGAACCCATCGGCTGACCTTAAGACTTTGGAAAACAAGTTAAAGGGTGCGGATAAGGTATCGGTTGGTCAGGCTGTGTTGGGTGCAGTATTCCGACACGATCAGACGGTTTGGGAATGCGATAGTATCTTTGATGTTAAAGGTCCACTTGCAGATCTCAAACGTTTAGCTGATGCTGACCTTGAACATCTAAAGAAAGAAGCTGAGAAAGAAGTCGTAGACTCTCCGACACAGAAAGGCTCTGATCAGATGGCTGGGAAGAATGCTGCTGATACAGGCGGTAGCTTCACGGACAAGGTAATCGGTAAGATCAAAGACGCATGGGACTCGAGTAAAGAGACTATCTCTAATACTTGGAACCGTGCATCTGAAGCCGCTAAGGATACTTACGCTGGGGCTAAGATCGCAGTTGGTATGGGTCCTGACTACGGTGAGGGCGGCGCATCTGGTGGCGTTATCAAGTCATCCGGTACTGGTGGCGAGATAATCTCAGGTACTGGCGGTAAGTTTGAGGAACTCCCTTATCCTTCTGCTAACAGTTCCATCAAAGCGGCATACCCAACTCTGTTGGCTGCCGGTAAGATGACTGGCGTACCGGTGGATTGGTTGACTGTGATTGCTGGTATTGAATCTGCATTTAACTACACCATCAAAGCTAAGACCTCTAGTGCAACTGGTTGGTACCAATTTATCGATGGTACCTGGGATGAAATGGTTAAGAAGTATGGTCCTAAGTACGGTATCCCTGGACTCGGTCAAGACCCTGAACGTAAAGCTCGGAAAGACCCACGTGCTTCCGCCCTGATGGGTGGTGAGTTCATTAAGAGCAACTACGATACTGTTAGTAAAGGTATCGGACGTAAAGACTTGACTGACACAGATATCTACATGGCTCACTTCTTAGGCCCTGGCGGCGCTATCAAGTTCCTCAAAGCCGACCCTAATGCAATGGCTTACAAGATCTTCAGTAAGGAGTACTCGGCTAACATGTCGATCTTCTTCGTTGATGCTAAGCCTTCGCAACCACGGACTATTTCAGCAGTCTACAAGCTTTTCCAAGCTAAGATGGACAAATTCTGGAATACTACGGGTAAGGGTTACCGTCAAGGTGAAGCTGGGCAACCGTCTAACGACGCCAATGCCGATTCTCAAACACCGGGTGCGGTAGAGAACAGCAGTACTGCTGATTCTGAAGCCATGAAGAATAAGCTGAAGGACGAGGCTGGCTCTAAAGACGGACTGGGTAGTGATTCTCCTGATGGGCAACCATCTGGTGATACCCCGATCGAACAAGGTGCTGGCACTGGTTCCATTCAGAAGCTTGCTCGGGATACAGCGCCGATGCCAGGTGCTCCAACTAGTGGTGGTGGTACTGGTAGTAATTCTTCGACCAACGCGACAGGTACTGATTCGGGTAGTGGTACAGCTGACAGCCAGCAACAAAGTCAGATGGATGCTGCACAGTCTCAGAACAACCGTCGGGCAGCTGAAGTTAAACGTGAACGTGAAGCGGCTAACGCAGTGAATGATATTCAGTCTAAACAGCTGAATGCACTCTACGAGATCCGTGACCTTCAACAACTTCAATTGGATAACTCCAAAGATTTGTTGAAGGCGTTCTCAGCCGCGCAATCCGCAGGTGGCCAAGGTTCAGGTAATAATATGAATCCGTCCACCATGCAAGGTCGCCCGGCTGCTCAGCGTAACAGCAGCTTAACCCTTCGCTAA

Genome Context

Tertiary structure

PDB ID

0f5eb3f7778e87f8aabbf462745b8a6171dbcc14a3ab18a1c372fd6f9e51bf6c

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5001

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence