Protein

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Genbank accession
AAO15641.1 [GenBank]
Protein name
Orf1
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNKAYTWNEKTGLDFCKELPQWNLLTRSNLRFYNRDTSEEPDKFDVGYYFRLNALSEVDRTSQFPSDWHRPYSLGIRLYNPKNASGTWGWTYWTHWEKLPVKPNLTQGKKMGVSMRLANFGRKPLDFNLKLLYGNTSTSVGTYKVEPWQYVFVSELVTLQTTETAKNLGLTVELDSTGQEEQIGLFFPRIEMDKVTPYVTTEEEYNYFKSQDMADSRPVYTGYSDSDSNDFRDYVWGGQLIDVNYELFGGDTKQNAVWCYCRPLNQRVLIGIDSDIYTNASGRTVNFHVLNGSKSVFDMTGNTLYPEQFQDDRQAFDGVGNDWATIQEPLYVVDQNTAIDPVAGEMANVCIEGYHYKQASQGYRVDEIPRSAILNIGYSLGSYYVNEDSGKEVNVLRSKVGITPSQVFGEPNYSGMNDWMTTCGLPNGLIMRPWRVRMVDTETNLTKIKGISIGWNVSLFQKYLVTDHMSEDWFRGYDNKRTKAIPDRVLFINDKQKRAWLYKYNPTKSAWERSVEYTIPASDTALLKAWTIVPKDGAMNGHIVFTDKTNAEMLQNIRPNWLDYDEFTPKVQYDEVKYNPQMFTNLYNTRYQWWGIKDENPQNQSYGPCVPYEMDFMTGLCKLERIYE
Physico‐chemical
properties
protein length:628 AA
molecular weight: 72859,86300 Da
isoelectric point:5,23626
aromaticity:0,13854
hydropathy:-0,62803

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAO15641.1
1 628
Domain Start End Length (AA) Confidence
N-terminal 1 124 124 0,0086
Central domain 125 491 368 0,8763
C-terminal 492 628 136 0,1563
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-124
Central
125-491
C-terminal
492-628

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHL92
[NCBI] 		197314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAO15641.1 [NCBI]
Genbank nucleotide accession
AF462053 [NCBI]
CDS location
range 1 -> 1887
strand +
CDS
TTGAATAAGGCATATACTTGGAACGAAAAAACAGGGCTAGACTTTTGTAAAGAGTTACCACAATGGAACTTGTTGACCCGTTCAAACCTTAGATTTTATAACAGGGATACATCTGAAGAACCAGACAAATTTGACGTTGGTTATTATTTTAGACTGAACGCTTTAAGCGAAGTAGACAGAACTAGCCAGTTCCCTAGTGATTGGCATAGACCTTATAGCTTAGGAATTAGACTTTACAACCCTAAAAACGCTAGTGGAACATGGGGGTGGACTTATTGGACACATTGGGAAAAATTACCAGTTAAGCCTAACCTCACACAAGGCAAAAAAATGGGTGTGTCAATGCGTTTAGCTAACTTTGGTAGAAAACCATTAGACTTTAATTTAAAACTATTATACGGTAATACTTCGACTTCTGTGGGTACTTATAAAGTTGAGCCGTGGCAATACGTTTTTGTTAGTGAATTAGTTACGCTACAAACTACGGAAACGGCTAAAAACTTAGGTCTGACTGTTGAGCTTGACAGCACAGGACAAGAGGAACAAATCGGCTTGTTTTTCCCTAGGATTGAAATGGACAAGGTAACACCATACGTTACAACAGAAGAAGAATATAACTATTTTAAGAGCCAAGACATGGCAGATTCACGACCTGTTTACACAGGGTATTCTGATTCAGATAGTAACGATTTTAGAGATTACGTTTGGGGTGGACAACTGATCGATGTAAACTATGAACTGTTCGGAGGAGATACAAAACAGAATGCCGTATGGTGCTATTGTCGTCCTCTTAATCAACGTGTATTAATTGGAATTGATTCTGATATATACACTAACGCAAGTGGTAGAACAGTTAATTTTCACGTTTTAAACGGTTCTAAGAGCGTGTTTGACATGACAGGGAACACTTTATATCCTGAACAATTTCAAGACGACAGACAAGCGTTTGACGGAGTGGGGAACGATTGGGCAACCATACAAGAACCGTTGTACGTAGTGGATCAAAACACAGCGATTGACCCAGTAGCAGGAGAAATGGCGAACGTATGTATAGAGGGTTACCACTATAAACAAGCAAGCCAAGGTTATAGAGTTGATGAAATACCACGTTCAGCAATTTTAAACATTGGTTACTCCTTAGGTTCTTATTACGTGAATGAAGATTCAGGCAAAGAAGTTAATGTCCTGCGTTCCAAGGTTGGTATAACACCATCGCAAGTATTTGGAGAGCCGAATTATAGCGGTATGAATGACTGGATGACTACATGCGGACTACCAAACGGACTAATCATGCGACCTTGGAGAGTTAGAATGGTAGATACAGAAACGAACTTGACTAAAATCAAGGGTATTTCAATCGGTTGGAATGTTTCTTTGTTCCAAAAATATCTAGTAACAGACCACATGAGTGAGGACTGGTTCAGAGGTTATGACAACAAGCGTACTAAGGCAATACCAGACCGTGTTCTATTCATCAATGACAAACAAAAAAGAGCGTGGCTTTATAAGTACAACCCTACCAAATCAGCATGGGAACGTTCGGTAGAATACACCATACCAGCTTCAGACACGGCACTATTAAAGGCTTGGACCATTGTACCAAAGGACGGTGCTATGAACGGTCATATAGTTTTCACAGACAAAACTAACGCTGAAATGCTTCAAAACATTCGACCTAACTGGTTAGATTATGACGAGTTCACTCCTAAAGTGCAGTATGATGAAGTCAAGTATAACCCTCAAATGTTCACGAACTTGTACAATACACGTTACCAATGGTGGGGAATTAAAGACGAAAACCCACAAAATCAGTCTTATGGTCCTTGTGTTCCTTATGAAATGGACTTTATGACAGGACTATGCAAATTAGAAAGGATATACGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d005715d85b9f01cfcb12dc87e53d74d80395d3f19d5b05fdacaf925616b1579
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3491
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification of the host determinant of two prolate-headed phages infecting Lactococcus lactis Stuer-Lauridsen,B., Janzen,T., Schnabl,J. and Johansen,E. 2003 12726722 GenBank