Protein

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Genbank accession
AET42240.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSNPIVYLDRYPSTDQGTLGRLTLPNGVELATIELPDRDNKPRVSRILAGRYRCTKWSSKKFGNVWILHDTKGRSYILIHKGNVAGDTALGFKTHSAGCILVGLKAGLIWGQLAVTNSGSALRKCHEALDEYDEFYIQIEDF
Physico‐chemical
properties
protein length:143 AA
molecular weight: 15912,97510 Da
isoelectric point:8,79047
aromaticity:0,09091
hydropathy:-0,27133

Domains

Domains [InterPro]
IPR043732
STR
9–131
IPR043732
AET42240.1
1 143
Architecture
STR
STR 9-131 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage SIO-2
[NCBI] 		700512 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AET42240.1 [NCBI]
Genbank nucleotide accession
HQ316604.1 [NCBI]
CDS location
range 60388 -> 60819
strand -
CDS
ATGAGCTCTAATCCTATTGTTTACTTAGATAGATACCCAAGTACAGATCAGGGGACACTAGGCAGACTTACCCTACCTAACGGTGTAGAGTTGGCTACTATTGAGCTACCCGATAGAGATAATAAACCTCGTGTTAGTCGAATCCTTGCGGGGCGTTATCGTTGCACTAAATGGAGTTCTAAAAAATTCGGTAATGTATGGATTTTACACGACACTAAAGGACGGTCTTATATTCTGATCCATAAAGGCAACGTAGCCGGAGACACGGCGCTAGGATTTAAAACGCATTCGGCGGGTTGTATTCTGGTAGGACTTAAAGCGGGTTTAATTTGGGGTCAGTTAGCAGTAACTAACAGCGGGTCGGCACTTCGTAAATGTCACGAGGCTTTAGACGAGTACGACGAATTTTACATACAAATAGAGGACTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dc37dbadc1f4137f0bb9462ffcef51f5615b90f692c5c86c8959acb7802d9c5d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage SIO-2 Henn,M.R., Azam,F., Pedler,B., Baudoux,A.C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Koehrsen,M., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Hollinger,A., Howarth,C., Jen,D., Larson,L., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank