Protein

View in Explore
Genbank accession
URY10636.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARGLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWHARNEALQFRNEAQNFRNQAEGFKNASDTNATNTKQWRDEAEGFRNEAEQFKNTAGQYATSAGNSASAAHQSEVNAGNSATASADSAASSKQQADRAKQEADKLGNWNALAGAIEGVDGNDVTFKGIIKTPFNVVGGGLVSTGAASIAKGLSVDGGLVVGEDIAAHKDVWVDGVVVANGGIQQQSGPNSTNDMWRLFIKGGPMHIGNRQGLHLGWNESVGTGASSFITNKGLGDGGFIFRTVNFENTAEIGRVTFTGNGGVRAFDLQAVNGARIEAGNNIVGARIFSGMGSCQFDTEGNLLGGLWNRVGGDLYNFLWNKGHFAKPPAGVQLFTSRGGDYLEGLVDNTAVGFRWFLSDRRLKENIKVVRSAEDMLNIIRSYIPVSYKYKDSEYVDKRGRTVRITGKNSRAGFITQDLIRIWPEAVDVLSDGMQSPDPNQIIGGLMLLVKNLDERVQELEKNNA
Physico‐chemical
properties
protein length:624 AA
molecular weight: 67777,73240 Da
isoelectric point:6,30693
aromaticity:0,08173
hydropathy:-0,36795

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil IPR030392
DC_0264
STR
1–619
DC_0264
IPR030392
CHP
518–586
IPR030392 Coil
URY10636.1
1 624
Architecture
ATT
STR
ATT 1-131 | STR 132-623 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh1
[NCBI] 		2950757 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY10636.1 [NCBI]
Genbank nucleotide accession
ON528715.1 [NCBI]
CDS location
range 1472 -> 3346
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTAACTCTTATCGGTGTAGACCGCAAGGTCCTTACTATTAATACAGACTACCGTTTCGCTACTCGTACTACAATCTCACTGACTAAGGCTTGGGGTCCAGCGGATGGCTACACTACTATCGAGTTACGTCGAGTAACCTCCACGACCGACCGCTTGGTTGACTTTACGGACGGCTCAATCCTTCGTGCGTATGACCTTAACGTTGCCCAGATTCAAACGATGCACGTAGCGGAAGAGGCGCGTGGCCTTACTGCCGATACCATCGGTGTCAATAACGATGGTCACTTAGATGCCCGTGGTCGTCGCATTGTGAACCTAGCGAACGCCGTGGATGACCGTGATGCTGTTCCTTTTGGTCAACTAAAGACCATGAACCAGAACTCATGGCATGCTCGAAATGAGGCCCTACAGTTCCGCAATGAGGCTCAGAATTTCCGCAATCAAGCGGAAGGCTTTAAGAACGCGTCAGATACTAACGCTACTAACACAAAGCAGTGGCGAGATGAGGCTGAGGGGTTCCGTAATGAGGCCGAGCAATTCAAGAATACGGCTGGTCAATATGCCACCTCTGCTGGGAACTCTGCGTCTGCTGCTCATCAATCTGAGGTAAACGCTGGGAACTCAGCTACTGCCTCCGCAGATTCTGCCGCTTCTTCGAAACAGCAAGCAGACCGAGCGAAGCAGGAGGCAGACAAACTGGGCAACTGGAATGCACTTGCAGGGGCCATTGAGGGTGTTGATGGTAACGATGTAACGTTTAAAGGCATTATCAAAACACCGTTTAACGTTGTAGGTGGCGGCCTTGTCTCTACTGGTGCTGCAAGCATTGCAAAGGGTTTGAGTGTTGATGGTGGACTTGTTGTTGGTGAAGATATCGCTGCACATAAGGATGTGTGGGTAGATGGTGTGGTTGTTGCCAATGGTGGTATACAGCAACAGTCTGGACCTAATTCCACTAATGATATGTGGCGACTGTTTATTAAAGGGGGACCAATGCATATTGGAAACCGACAAGGCCTTCACCTTGGTTGGAACGAGAGTGTTGGTACAGGGGCGTCATCCTTTATTACCAACAAAGGCTTAGGTGATGGGGGTTTTATTTTCCGCACGGTAAACTTTGAGAACACTGCTGAGATTGGTCGCGTTACATTCACTGGTAACGGTGGAGTACGCGCCTTCGATTTACAAGCAGTTAACGGTGCGCGCATTGAGGCTGGAAACAATATAGTAGGCGCAAGGATTTTCTCAGGAATGGGCAGCTGCCAATTCGATACCGAAGGTAACTTACTGGGAGGACTATGGAACCGCGTTGGTGGTGACCTATACAACTTCCTGTGGAACAAGGGTCACTTCGCTAAGCCACCTGCTGGAGTCCAGTTGTTTACATCCCGTGGTGGTGACTACCTCGAGGGTCTCGTGGATAACACGGCTGTAGGGTTCCGCTGGTTTCTGTCAGACAGGAGACTTAAAGAAAACATAAAGGTTGTACGCTCCGCTGAGGATATGCTCAATATTATCCGCTCGTACATCCCGGTTTCCTATAAGTATAAGGACTCTGAGTATGTTGATAAGCGTGGTAGAACGGTAAGAATTACCGGTAAGAACTCTCGCGCTGGTTTCATTACTCAGGATTTGATTAGAATCTGGCCTGAGGCGGTGGACGTGCTGTCCGATGGTATGCAATCACCAGACCCTAACCAAATCATTGGTGGACTAATGCTTCTTGTCAAGAACCTTGACGAACGTGTACAGGAGTTGGAGAAAAATAACGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
785da5c2b2a6d1dfa6cb4334ac224bd8b4f08eebb17f2b242d3537feb9f0be0a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6709
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. 2022 36421303 GenBank