Protein

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Genbank accession
ADW01245.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MAILVGDAATMQGKYVVLDTTVGSTRSVAVPQLSGHQGDAGRIVYLAVKDGTVPHNIDGQKLVLKAKDASGTPKVSDTMTAVDSSAGGLVQFTVPSQFYQADGPYNTAYFELKSTSDDTVISTINVSFEVLESATIMTTGQSEVYNNEMGNKMDEVNTSITNQLKALQEQVDTASTLAKTAQASLDAVSAAAKANSFATLTGENTYSGNNTFNGKTTINDLSSPTLDSLKSTLTNNINAVSNSVNSQLAGKLTVTENWTRNYTLGGAFTAPQGGANQFALSRYKIMDGLSIITGRGDLVVNSANEYFEGTITLPWIVDNADTAFCQMYWDSKGDYTYTLPHLGVWDKTLGISMKGKRTNQTCRLSLVIFTVDR
Physico‐chemical
properties
protein length:373 AA
molecular weight: 39847,01340 Da
isoelectric point:4,95928
aromaticity:0,07507
hydropathy:-0,19625

Domains

Domains [InterPro]
IPR018913
ATT
30–135
IPR018913 DC_1243
IPR018913
ATT
37–148
IPR018913 Coil
ADW01245.1
1 373
Architecture
ATT
STR
ATT 30-148 | STR 149-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LF1
[NCBI] 		947980 Uroviricota > Caudoviricetes > Lafunavirus >
Host Lactobacillus sp.
[NCBI] 		1591 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADW01245.1 [NCBI]
Genbank nucleotide accession
HQ141410 [NCBI]
CDS location
range 19913 -> 21034
strand +
CDS
ATGGCAATTTTAGTAGGTGATGCCGCCACTATGCAAGGTAAGTATGTGGTACTCGACACTACGGTTGGTTCGACCCGTTCAGTGGCCGTGCCACAGCTTTCTGGCCATCAAGGTGACGCCGGGCGGATTGTCTACCTGGCAGTCAAGGACGGCACGGTACCGCACAACATCGATGGCCAGAAACTCGTGCTCAAAGCAAAGGATGCTAGCGGCACGCCAAAGGTCTCTGACACGATGACCGCTGTTGACTCATCGGCAGGTGGGCTAGTCCAATTTACGGTACCAAGCCAGTTCTACCAGGCTGACGGGCCTTATAACACGGCATATTTTGAGCTTAAGTCAACTAGCGATGATACGGTCATTAGCACGATCAACGTAAGCTTTGAGGTGTTGGAGTCCGCAACCATCATGACGACCGGTCAATCGGAAGTCTACAACAACGAGATGGGCAACAAGATGGACGAGGTAAATACCTCAATCACCAACCAACTCAAAGCCTTACAGGAACAGGTAGACACAGCCTCCACGCTGGCCAAAACGGCACAAGCTAGTCTTGACGCTGTGTCAGCCGCCGCAAAGGCCAACTCGTTTGCTACACTGACCGGTGAAAATACTTATTCCGGCAATAATACCTTTAATGGGAAAACTACAATTAATGATCTATCAAGCCCAACTCTTGATAGCTTAAAGTCAACACTGACAAACAATATTAACGCTGTTTCCAATAGTGTTAACTCACAGTTGGCCGGCAAGCTAACGGTGACTGAAAATTGGACGCGGAACTACACGCTTGGCGGTGCATTTACCGCACCACAAGGTGGAGCAAACCAGTTCGCTTTAAGCCGCTACAAGATCATGGACGGTTTGTCAATCATTACCGGACGTGGTGACTTAGTTGTCAACTCAGCCAACGAGTACTTTGAAGGCACAATTACGCTTCCTTGGATAGTTGATAACGCTGATACGGCCTTCTGCCAAATGTATTGGGATTCTAAAGGCGATTATACCTACACCTTGCCACACTTGGGTGTGTGGGATAAAACGCTTGGAATCTCGATGAAGGGTAAGCGCACTAATCAAACGTGCCGGCTCTCCCTCGTGATCTTTACAGTGGATCGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
679bd9bc08407d81c1368a8b20a9f43ba34b2b84a3b24b66a2b72bb3bb8c6e46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8010
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of the Lactobacillus temperate phage LF1 Yoon,B.H. and Chang,H.I. 2011 21811858 GenBank