Protein

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Genbank accession
YP_004322518.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MASNILIKRSTGSTAPGSITFGELAITTGANGNQANAGDRLFVGDNNGAAQIVGGRYFMDMLDHVHGTVTASSAAIVDSNSKVDQWLVDDISLNANVITTSTTDADLIFRANGTGKLVIEDGQELEFGTTGDVEFSFNDSDAVLDIKRVTGTPDLRIADDMKLNFGNTKDAAIYYDETTSDKIQVEGADWNYGTGVQVNIADTTDASNVATAAFTVAGGIGVAATAYIKDLNVDDNTTIGTAAGDSLNVNATTTFQNGVTFNGTTTISGTTSQTGSIEIDNLKLDGNVLSTINSVQELIIDPDPTTDAGGLVVIKGDLQIDGTTTTVNSASMSVNDPTIELGDPTTPVTMTAEAAGGQAVVVVDAIDQLQVGDAVTSTTAGIPNSTVINSINTGTKAVTLSNNLSQTMAAGSVLVTVTGADDQLDRGVKVHYNASGTNQFGFFGYDRTGGADGAGAWTFIENATDTNTVFGVTGDRGTVVLGDLELDTDLEVQFGGTGVSTFTSNGIVYGNAAGALQVTAAANMATPGSGDDASTSFQILTVTAAGVPVWSDTIDGGTF
Physico‐chemical
properties
protein length:559 AA
molecular weight: 57111,70910 Da
isoelectric point:4,05003
aromaticity:0,05725
hydropathy:-0,00626

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-HM1
[NCBI] 		445700 Uroviricota > Caudoviricetes > Eurybiavirus >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004322518.1 [NCBI]
Genbank nucleotide accession
NC_015280 [NCBI]
CDS location
range 68481 -> 70160
strand +
CDS
ATGGCATCCAATATTCTAATTAAAAGGAGTACTGGTTCAACCGCACCTGGTAGTATTACGTTTGGTGAACTCGCCATTACGACAGGAGCAAACGGTAATCAGGCAAACGCAGGAGATAGACTATTTGTTGGAGACAACAATGGTGCTGCACAGATTGTAGGTGGTAGATACTTTATGGACATGTTGGATCATGTTCATGGAACAGTTACTGCAAGTTCTGCTGCTATCGTAGACAGTAATTCAAAGGTTGACCAGTGGTTAGTAGATGACATTTCCCTCAACGCAAACGTCATTACTACTTCTACTACTGATGCTGACCTCATCTTCCGTGCAAATGGCACAGGTAAACTGGTAATTGAAGATGGTCAAGAACTAGAGTTTGGAACTACAGGAGATGTAGAATTCTCATTCAATGACTCAGACGCAGTTTTAGACATCAAGCGAGTAACAGGAACCCCTGACTTACGTATCGCTGATGATATGAAACTAAACTTTGGTAATACAAAGGATGCTGCTATCTACTATGACGAAACAACCTCTGACAAAATCCAAGTAGAAGGTGCAGACTGGAACTATGGCACTGGTGTCCAAGTTAATATTGCAGACACTACAGACGCTTCTAACGTTGCTACAGCAGCGTTTACAGTTGCGGGTGGTATTGGTGTTGCTGCAACTGCATACATCAAAGACTTGAATGTAGATGACAACACTACGATTGGAACAGCAGCTGGAGATTCTCTCAATGTTAATGCAACAACTACTTTCCAAAATGGTGTAACATTTAATGGAACTACAACTATTTCTGGAACCACATCTCAGACTGGTTCAATTGAGATTGATAACCTTAAGTTAGATGGTAACGTCTTATCTACTATTAACTCTGTTCAAGAGTTGATAATTGACCCTGACCCTACAACTGATGCGGGTGGTCTTGTTGTTATTAAAGGTGACTTACAGATTGATGGAACTACAACTACAGTGAACTCTGCTTCAATGTCAGTTAATGATCCTACAATTGAATTAGGAGATCCAACAACTCCTGTTACAATGACTGCAGAAGCAGCTGGTGGTCAGGCAGTGGTGGTTGTAGATGCTATAGATCAACTACAAGTTGGTGACGCAGTTACATCAACAACAGCTGGTATTCCTAACAGCACAGTTATTAACTCTATTAATACTGGAACTAAGGCAGTTACCTTAAGTAATAACCTTTCTCAAACAATGGCAGCTGGTTCTGTTCTTGTTACAGTAACTGGTGCTGACGATCAATTAGATCGTGGTGTTAAGGTTCATTATAACGCATCTGGAACTAATCAGTTTGGTTTCTTCGGTTATGACCGCACAGGTGGTGCCGATGGAGCTGGTGCATGGACATTTATTGAAAATGCAACAGATACAAATACTGTATTCGGTGTCACAGGTGACCGTGGTACAGTTGTATTGGGTGATTTAGAACTTGATACAGACCTTGAAGTTCAGTTCGGTGGAACTGGAGTTAGCACATTTACCTCAAATGGTATTGTGTATGGTAACGCAGCGGGTGCTTTACAAGTAACTGCAGCTGCAAACATGGCAACACCTGGTTCTGGAGATGATGCGTCAACATCATTCCAAATATTAACCGTTACCGCTGCGGGTGTCCCTGTATGGAGTGACACAATCGACGGTGGTACTTTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb03e5624d06f8ec1510eebcfcdef91c99df5716131d9d0988b86e329007bcb8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7025
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage M4-247 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank