Protein

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Genbank accession
YP_009835162.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLEDGTTKMDSRTIHPMEIIVEVFCPSIDVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPDMISATPARLTFSQVLVQNPKPIMFRNAGDSSMIDRGLALAEDVVGSAGDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:134 AA
molecular weight: 14818,88580 Da
isoelectric point:4,33042
aromaticity:0,05970
hydropathy:0,08060

Domains

Domains [InterPro]
DC_0601
STR
1–133
DC_0601
IPR054442
ATT
11–87
IPR054442
YP_009835162.1
1 134
Architecture
STR
ATT
STR
STR 1-10 | ATT 11-87 | STR 88-133 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage BrSP1
[NCBI] 		2029635 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus BrSP1 >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009835162.1 [NCBI]
Genbank nucleotide accession
NC_048675.1 [NCBI]
CDS location
range 29400 -> 29804
strand +
CDS
ATGCTGGAAGATGGTACGACCAAGATGGATTCCAGAACGATCCACCCTATGGAAATCATCGTCGAAGTATTTTGCCCTTCAATTGATGTCGTCGATCAGATCAATCAATTGCTCCTGGATCGCGACACACTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGGATGATGTGTACCAGCGAAGCGCTCAATCAGACTCCGGATATGATATCGGCGACTCCTGCGCGGCTGACATTCTCCCAAGTTCTCGTCCAGAATCCCAAGCCTATAATGTTCAGAAATGCAGGGGACTCTTCTATGATCGACCGAGGGCTGGCCCTAGCTGAAGACGTGGTTGGCTCGGCCGGCGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a7074c362d0b6387b05a0af0a15fb0b4fd787dd76fe6c7d539256f08a652cf5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a Pseudomonas aeruginosa-infecting phage isolated in a water treatment utility located in Sao Paulo, Brazil Ardisson-Araujo,D.M.P., Melo,F.L., Ribeiro,B.M. and Wolff,J.L. 2019 — GenBank