Protein

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Genbank accession
WPK40331.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSNLNDFFGSSGSEGGGAEVKRLDDLVDVSVASPTNGQTLVFDNTGWVNRKLSYNDLSNLPSISNTLSGLDDVDTAGTIAGYVLQFNGTKWVGMPASSSISLDDLSNVAITTPSINQTLLFNGSTWYNGSVDFNNLINTPVIPTQLGDLSDVSVSASTQEGSVLVFRTGQWIGSVINYNDLSNTPTIPQNDSFTFLGLSDTNDIPEANGFLKWNNLSTEIEYVTSIPSSAITGLANVATTGLLSNLVDVNVSGVSNGQVLTYNSSSSTWVPTTPSTGGGTSDPTAIFSTDGNTYINTEELVDELVLKTGPGSGNVNVILGGGGKIVVEGQSPEIISETSLKLTGSNLYLNELSWPTTDGTSGQVLATDGNGNLSFITVSTGGTTILINWRGEWEETSYNINDAVSYAGSSYICVAEVAGGDISVPPSNTNLNWNILALKGEDGSFFTYKGTYDSNTEYVDKDVVYYNGSSYVVLDGQGPITGITPTDQSKWGILALAGSGGTGSGFTYKNEYNNSETYQDQDVVSYGGSSYIVSPGNGPVTGILPTDSSIWGIIALKGQDGSGTGNQSLEDLTDVSSATPTSGNVLVANGSSWSSSKLSYSQLQGLPTLSVVATSGSYNDLLDKPSNTGTFIGLSDTDTPSLPNGFLKWNAQGTSISYVQSIPSESISGLATVATTGDYSDLTNTPNIPVMLDDLTDVNLVTPPVTGQALVYNGTYWLAGNAGSGSSTLASLTDVNLTTPTNNQVLSYDNTQNLWINTQIDYDDILNTPSIPVNNSFSLVGLNDTDNSAIPNAFLKWNSTGNSVEYVQSISASSITGLSTVATTGDYNDLTNLPSIPENISDLNDVDTSTAPTDGQILIYSAALGKWIPGDQSGTSPVPGGFPGEWLKINYTPGNLIGTIECSPNISYTIVDNVANNNLTLDLVFANRPYPPAGWMWYGYLVTQGRYVLKMQDTTSHPHTLELTTTENPFGTGTGKLSGFQCRVSTTGAQSYGPLQPTHAYVIFGW
Physico‐chemical
properties
protein length:1006 AA
molecular weight: 105873,62890 Da
isoelectric point:4,05003
aromaticity:0,08648
hydropathy:-0,16362

Domains

Domains [InterPro]
DC_0755
ATT
2–97
DC_0755 DC_1797 DC_0165 DC_0755
DC_0755
ATT
93–158
DC_0755 G3DSA:2.10.10.90 DC_1461
WPK40331.1
1 1006
Architecture
ATT
STR
ATT
ATT 2-158 | STR 163-758 | ATT 759-1006
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK40331.1
1 1006
Domain Start End Length (AA) Confidence
N-terminal 1 879 879 0,9980
Central domain 880 995 117 0,0693
C-terminal 996 1006 10 0,9846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-879
Central
880-995
C-terminal
996-1006

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Paride
[NCBI] 		3092178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK40331.1 [NCBI]
Genbank nucleotide accession
OR805295.1 [NCBI]
CDS location
range 74910 -> 77930
strand +
CDS
ATGTCTAATTTAAATGATTTTTTTGGATCAAGTGGATCAGAAGGCGGGGGAGCCGAAGTTAAAAGACTAGACGACTTAGTAGACGTTTCTGTAGCTAGTCCAACTAACGGTCAAACCCTTGTTTTTGACAACACAGGCTGGGTAAACAGAAAACTTAGCTACAATGATTTATCTAATCTTCCGTCTATATCAAACACATTAAGTGGATTAGATGATGTAGACACTGCCGGTACTATAGCTGGATATGTATTACAATTTAACGGAACAAAATGGGTGGGTATGCCTGCCAGTAGTTCTATTTCGTTAGACGATTTATCTAATGTTGCTATTACAACACCCTCAATAAACCAAACGCTGCTATTTAATGGATCAACCTGGTATAACGGATCTGTAGATTTTAATAATTTAATAAACACACCCGTTATTCCTACACAGTTAGGCGATTTGTCAGATGTTTCTGTCAGTGCTTCTACTCAAGAAGGAAGTGTACTAGTTTTTAGAACAGGACAATGGATCGGTTCTGTAATAAATTACAACGATTTGTCAAATACTCCTACTATACCGCAAAACGATTCATTTACATTCTTAGGTTTATCCGATACTAACGATATACCGGAAGCAAATGGGTTTTTAAAATGGAACAATTTAAGTACAGAAATAGAATATGTTACTTCAATTCCTTCGTCTGCTATAACAGGATTAGCCAATGTTGCAACAACCGGTTTATTATCCAATTTAGTAGATGTGAATGTCAGTGGTGTATCTAATGGCCAGGTTCTAACATATAATTCCTCTTCTAGCACATGGGTTCCTACTACGCCATCGACCGGCGGCGGAACAAGTGATCCTACTGCTATTTTTAGTACAGACGGTAATACGTATATTAATACCGAAGAATTAGTAGACGAGCTAGTTTTAAAAACCGGACCTGGATCCGGAAATGTAAATGTCATTCTTGGTGGCGGCGGCAAGATTGTCGTTGAAGGTCAATCTCCGGAAATAATATCGGAAACTAGTTTAAAATTAACAGGTAGCAATTTATATTTAAATGAACTATCTTGGCCTACAACTGACGGAACGAGCGGTCAAGTTTTAGCTACAGACGGAAATGGAAATCTCTCATTTATAACAGTATCGACCGGCGGAACTACTATACTCATAAACTGGCGCGGCGAGTGGGAAGAAACTAGTTATAATATAAACGACGCAGTAAGTTATGCTGGTTCTAGTTATATATGTGTTGCTGAAGTAGCTGGTGGCGATATTTCTGTTCCGCCGAGCAATACAAACTTAAATTGGAATATACTAGCACTAAAAGGTGAAGACGGATCATTCTTTACTTATAAGGGAACTTATGATTCTAATACCGAATATGTAGATAAAGATGTAGTTTATTATAACGGTTCATCTTATGTAGTGTTAGACGGGCAAGGACCTATTACAGGAATCACCCCTACTGACCAATCTAAATGGGGTATATTAGCGTTAGCTGGTTCGGGAGGAACAGGCAGTGGTTTTACTTACAAAAATGAATATAATAATTCGGAAACTTATCAAGACCAAGACGTTGTTAGTTATGGAGGATCTTCATACATTGTTAGTCCTGGCAACGGTCCTGTTACTGGTATTTTGCCTACCGATTCTTCTATTTGGGGTATTATTGCACTCAAGGGTCAAGACGGGTCTGGAACAGGTAACCAGTCGCTTGAAGATTTAACTGATGTATCTAGTGCCACTCCTACTTCAGGGAATGTGTTAGTAGCTAACGGGTCATCATGGTCTTCTTCTAAGTTATCGTATAGTCAACTCCAAGGTCTACCTACTTTATCTGTAGTTGCTACTTCTGGTAGTTATAATGACTTATTAGATAAACCTTCTAATACAGGAACATTTATTGGATTATCAGATACTGATACTCCTTCCCTACCGAATGGATTTTTAAAATGGAATGCACAAGGAACATCTATATCTTATGTACAATCAATACCTTCAGAATCTATTTCTGGTTTGGCTACTGTTGCTACTACCGGTGATTATAGCGATTTAACTAATACACCTAACATACCAGTTATGCTAGACGACTTGACCGATGTGAATTTAGTTACGCCTCCTGTAACAGGACAAGCTTTAGTATACAACGGTACGTATTGGTTGGCAGGCAATGCTGGAAGCGGTTCGAGCACACTAGCATCATTAACTGACGTTAACTTAACTACTCCTACTAACAATCAAGTATTATCGTATGACAATACACAAAATTTGTGGATTAATACACAAATCGATTATGATGATATTTTAAATACACCTAGTATACCCGTAAATAATAGCTTTAGCTTGGTTGGGTTGAACGACACGGATAATTCTGCTATTCCGAACGCATTCTTAAAATGGAACTCAACCGGGAATTCAGTAGAATATGTTCAGTCTATTTCTGCTAGTAGTATAACAGGATTATCTACTGTTGCTACAACTGGAGACTACAACGACTTAACTAATTTACCTTCTATTCCAGAAAATATAAGTGATTTAAATGACGTAGATACATCTACTGCACCTACTGATGGTCAAATACTCATATATAGTGCAGCACTAGGAAAGTGGATTCCTGGAGATCAAAGCGGTACTAGTCCAGTTCCAGGCGGCTTCCCCGGTGAATGGTTAAAAATCAATTATACCCCTGGCAATTTAATAGGTACAATTGAGTGTTCGCCTAACATATCATACACTATAGTAGATAATGTTGCAAATAATAATCTTACTTTAGATTTAGTATTTGCAAATAGACCATACCCGCCTGCTGGATGGATGTGGTATGGTTACTTAGTAACACAAGGCAGATATGTATTAAAAATGCAAGATACTACTAGTCATCCGCATACGTTAGAGCTTACAACTACTGAAAATCCGTTTGGGACAGGAACTGGAAAATTATCAGGATTCCAGTGCAGGGTATCAACTACTGGAGCCCAAAGTTATGGTCCTCTTCAGCCTACGCATGCATATGTGATATTTGGGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7a21e687f5b8fa2718371d90a76185cc28de4ff4edfe91ecb76566226be8fa20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5984
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. — — GenBank