Protein

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UniProt accession
E3SPB8 [UniProt]
Protein name
Short tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSFYQEIRTAKAAAIGTIMPWVGNISDIPDGWIVCDGTQVSAKDFPLLARAIGDTYNLSTTVTQGLINTFANNASTEAGRIPDTYIYSPIDGSGGGATFAVIVADAGTQAGGAPNGVGGTVTVQRLQQGANYEINDVLTIPSGNSGGGSDILITVATVEEGSVSTFGGEFPSYQGEIVLPALINRPLVDMEQDYLGPGSPTGRVFDLDSTSVSEISSFIGVNSDTGVPTSFNDVATDVVFELNERTTAPAGDSGEISYYYSGKLQANTIVTGSGQGNRVMFFGPRKLGRGHIKGHGHGGRIDTIVKDPETQPGEGVIPWSNINYNFDAQVDTSDSDIFIINDNEFQLEYNMSDQLRGRSGFGGGIPGRVIGAINAENPPVNWTPQNVAWTPIKSVLTHPLTHRTFNEGVGLKKGALSGGIAGFNKGPGQREAVDYGQNGQQITQFSNGLTNWYPDLLEYNGDAEAGALADPSAFNTYDTFNSNAGWDFKRTTIGVAASRDIILAHTHDEFDVSFDLSGLRPLNSLNVYVTAPAGNLNLDNARNVGVFQINFNTTQPGMTSVYVIRAY
Physico‐chemical
properties
protein length:567 AA
molecular weight: 60162,65230 Da
isoelectric point:4,49769
aromaticity:0,09171
hydropathy:-0,21764

Domains

Domains [InterPro]
IPR037053
ATT
5–71
IPR037053 DC_0344
SSF88874
STR
7–60
SSF88874
IPR011083
ATT
16–62
IPR011083
E3SPB8
1 567
Architecture
ATT
STR
ATT 5-71 | STR 179-567
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn1
[NCBI] 		444861 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus syn1
Host Synechococcus sp. WH 8101
[NCBI] 		59932 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99134.1 [NCBI]
Genbank nucleotide accession
GU071105 [NCBI]
CDS location
range 33243 -> 34946
strand +
CDS
ATGTCTTTCTATCAAGAGATCAGAACCGCAAAGGCAGCTGCCATCGGAACAATCATGCCATGGGTCGGGAATATCTCAGATATTCCTGACGGTTGGATTGTATGCGATGGAACTCAAGTCAGTGCCAAAGACTTTCCATTGCTTGCAAGAGCAATTGGAGACACATACAATCTATCTACTACAGTTACTCAAGGTCTAATCAATACCTTTGCTAACAACGCATCAACAGAAGCAGGAAGAATTCCTGATACGTATATTTACTCACCGATTGATGGTAGTGGTGGTGGTGCAACTTTTGCTGTCATTGTTGCTGATGCAGGAACACAAGCAGGTGGTGCTCCTAATGGTGTTGGTGGAACAGTAACTGTTCAAAGATTACAGCAAGGTGCTAACTATGAAATTAATGATGTTCTAACTATTCCCTCAGGCAACTCTGGTGGTGGATCTGATATTTTAATTACTGTAGCTACTGTTGAAGAGGGATCTGTTTCTACATTTGGTGGAGAGTTTCCTAGTTATCAAGGAGAGATTGTTCTTCCTGCTCTAATCAATAGACCTCTGGTTGATATGGAGCAAGATTATCTTGGACCAGGATCTCCCACTGGTAGAGTGTTTGATCTTGATTCAACTTCTGTATCAGAAATTAGTTCATTTATTGGTGTAAACTCAGACACAGGTGTTCCTACATCATTTAACGATGTTGCTACTGACGTTGTGTTTGAATTAAATGAGAGAACAACAGCACCAGCTGGTGATAGTGGAGAGATTTCATACTACTACAGTGGTAAACTACAGGCAAACACTATTGTCACAGGATCTGGTCAGGGTAATCGTGTTATGTTCTTCGGTCCTAGAAAACTAGGAAGAGGACACATTAAAGGTCATGGTCATGGCGGTAGAATTGATACTATCGTAAAAGATCCTGAAACACAACCAGGAGAAGGTGTGATTCCATGGTCAAACATCAACTACAACTTTGATGCACAGGTTGATACTTCGGATAGCGACATCTTTATCATAAATGATAACGAGTTTCAATTAGAATATAACATGAGTGATCAGTTGAGAGGTAGATCTGGTTTTGGTGGTGGTATCCCTGGACGTGTCATTGGTGCTATTAATGCAGAAAATCCACCAGTTAACTGGACCCCACAAAATGTTGCGTGGACTCCTATCAAATCAGTCTTGACTCATCCACTCACCCATAGAACATTTAACGAGGGTGTTGGTCTAAAGAAAGGTGCATTGTCTGGTGGTATTGCTGGATTTAACAAGGGTCCTGGACAAAGAGAAGCAGTTGACTATGGTCAGAATGGTCAGCAGATAACTCAGTTCAGTAATGGATTGACTAACTGGTATCCAGATCTTCTTGAATATAATGGTGATGCAGAAGCAGGAGCACTAGCAGATCCTTCAGCATTCAATACTTATGATACGTTTAATAGTAATGCTGGTTGGGACTTCAAGAGAACAACTATTGGAGTTGCTGCATCAAGAGATATTATTCTCGCACACACTCATGACGAATTTGATGTATCATTTGATCTTTCTGGTCTAAGACCATTAAATAGTTTGAACGTATATGTTACTGCTCCAGCAGGTAACTTGAATTTAGATAATGCAAGAAACGTTGGTGTATTCCAGATTAACTTCAACACGACTCAACCTGGAATGACTTCAGTATATGTAATCAGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb3e1aa0e7817adfd2b2f8abe00a73176331cf242b1000a737c2574e2ee18036
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3506
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50