Protein

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Genbank accession
XXL68684.1 [GenBank]
Protein name
long-tail fiber distal connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYAARVTFNNGVQVPYAINNTNPCGVYPGNGDNATFAVANIDIVSWNGIGFKSSQGSAARTVVINARNGDINTKGVVSATGQVRSDATSPIAANDLTRKDYVDGRINIVTDNANSRVLRKGDTMTGTLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23598,80470 Da
isoelectric point:6,71691
aromaticity:0,09502
hydropathy:-0,35249

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
XXL68684.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXL68684.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 199 199 0,3778
Central domain 200 210 12 0,0947
C-terminal 211 221 10 0,8970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-199
Central
200-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Mizar
[NCBI] 		3434943 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXL68684.1 [NCBI]
Genbank nucleotide accession
PV714129 [NCBI]
CDS location
range 156830 -> 157495
strand +
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCTGTTATATGGCATCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCGGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACGTATGCCGCTCGAGTAACATTTAATAATGGTGTGCAAGTACCATATGCTATAAACAATACAAACCCATGTGGTGTTTATCCAGGTAATGGTGATAATGCTACTTTTGCTGTAGCAAATATCGATATTGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCAGCAGCCCGAACTGTTGTAATTAATGCACGTAATGGTGATATTAATACAAAAGGTGTTGTGTCTGCGACAGGTCAAGTAAGAAGCGATGCGACTTCTCCTATAGCAGCAAATGATCTCACAAGAAAAGATTATGTTGATGGACGAATAAATATTGTTACGGATAACGCAAATTCCCGTGTATTGCGTAAAGGCGATACCATGACTGGTACTTTAACAGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73e14ee7f1df5aeaa1c11fc598e2e7abafb7f06d43028a4550b05510c3fb35c1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Mizar: an enterobacteriophage that infects UPEC strains from phylogroups A and B Valencia-Toxqui,G. and Ramsey,J. 2024-10-22 — GenBank