Protein

View in Explore
Genbank accession
XJP11695.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSLTKINPSLIDGGAYPIGKVLGKKTSTSVEFIDPTEAAKIPGSQGVEFDTTTGTLTVIWPDGSQSSVIGLPTADQLKSGREGKQGKEGLRGLPGANGRDGRDGEDGCPGPRGPRGRNGPTGNTGPVGATGNTGSVGPTGPTGPTGSPGRDAAIDEYRTAQALNPVTGAVIPNAWIGSNRDMNTGFTQNMGRVVNASTTDTIHVVFNTAFINRCISIQITFVNAALNQAKTYQLYNLDGTSAMNENALLGGFTIKSTGTNTAGWDFWYTAVGD
Physico‐chemical
properties
protein length:273 AA
molecular weight: 28165,88090 Da
isoelectric point:5,89758
aromaticity:0,06227
hydropathy:-0,38718

Domains

Domains [InterPro]
DC_0452
ATT
1–59
DC_0452 IPR008160 DC_0380
PTHR24637
Unmapped
54–151
PTHR24637
XJP11695.1
1 273
Architecture
ATT
STR
RBD
ATT 1-59 | STR 80-134 | RBD 152-273
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phB78
[NCBI] 		3236633 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XJP11695.1 [NCBI]
Genbank nucleotide accession
PP942979.1 [NCBI]
CDS location
range 64774 -> 65595
strand -
CDS
ATGTCTCTTACAAAGATTAATCCTTCACTTATCGACGGCGGTGCATACCCTATCGGTAAAGTGTTAGGTAAGAAGACTAGCACATCTGTAGAGTTTATTGACCCTACAGAAGCTGCGAAGATTCCCGGCTCTCAGGGTGTGGAGTTCGACACAACTACAGGTACTCTAACAGTCATTTGGCCAGATGGTAGTCAGTCTAGTGTTATCGGACTGCCTACTGCCGACCAGCTCAAGTCAGGACGCGAAGGTAAACAGGGTAAAGAAGGTCTGCGTGGCCTTCCTGGTGCTAACGGTCGTGATGGGCGTGACGGTGAAGACGGCTGCCCGGGCCCTCGTGGTCCGAGGGGTCGTAATGGACCGACAGGTAACACTGGGCCTGTCGGCGCTACTGGTAATACTGGCTCTGTGGGTCCTACTGGACCTACTGGACCTACCGGTAGTCCTGGTCGAGATGCTGCTATCGACGAATATCGTACAGCACAAGCTCTTAACCCTGTGACCGGCGCTGTAATACCGAACGCATGGATTGGTAGTAACCGCGATATGAACACTGGCTTTACTCAGAACATGGGTCGAGTCGTGAACGCGTCAACTACTGATACAATCCACGTTGTGTTTAACACGGCATTCATCAACCGTTGTATCAGCATTCAGATTACCTTCGTGAACGCTGCACTCAACCAAGCGAAGACCTACCAGCTCTACAATCTGGACGGTACGAGCGCGATGAATGAGAACGCCTTGTTAGGCGGTTTCACCATCAAGTCTACTGGCACGAACACTGCTGGTTGGGACTTCTGGTATACTGCGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9c4f7c69c03dfbd7f3433dad276a7957a57034315519c6600348f873206474f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage phB78 Yang,L.Y., Zheng,Y.Y. and Cui,B.M. 2013-12-26 — GenBank