Protein

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UniProt accession
A0A8S5PW99 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MADNTLTLKFDEISAMALVEKVGKEIILPIVEGAGKSAYAIAVAHGYKGTESEWLESIRGVQGPQGVPGPQGEPGSIGKPGPQGEPGSAERAAELLKSKNIYLENTDVDTVITTVIEKLFETGSLQEATFRQLEYTQPRTGQDYIDLTGEPHFKVAVNGGEKREFESDNMRVAIEPFGPKNIELKYYDLNDNEQQTLIIRGTNVTADQTETADNGVVYKKFGDELDIDVSNYDGTSIFKFAPRTWEVTAETKKTIKTNKKVVLLLNADSLLNNQGGEAVHQFSEHEYVANPELVVFKSQTDVSAGTYISIAGEGYRFGYFAMGDRRNPYFVWDMSQNKYVNSATETL
Physico‐chemical
properties
protein length:347 AA
molecular weight: 38292,22560 Da
isoelectric point:4,75040
aromaticity:0,09222
hydropathy:-0,47550

Domains

Domains [InterPro]
DC_1725
STR
35–309
DC_1725
G3DSA:1.20.5.320
STR
60–116
G3DSA:1.20.5.320
A0A8S5PW99
1 347
Architecture
STR
STR 35-309 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctRbn2
[NCBI] 		2825104 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE11016.1 [NCBI]
Genbank nucleotide accession
BK015524 [NCBI]
CDS location
range 1843 -> 2886
strand -
CDS
ATGGCAGATAACACATTAACTTTGAAATTTGATGAAATCTCAGCAATGGCCCTTGTCGAGAAGGTAGGAAAAGAGATTATACTGCCTATTGTTGAGGGTGCTGGCAAAAGTGCCTATGCTATCGCAGTAGCACATGGGTATAAAGGTACTGAAAGTGAATGGCTTGAAAGTATCCGTGGTGTACAAGGCCCGCAAGGTGTGCCAGGGCCTCAAGGCGAACCGGGGTCAATTGGTAAGCCTGGTCCTCAAGGTGAGCCAGGCAGTGCAGAACGTGCGGCGGAGCTTCTTAAATCTAAAAACATTTATTTAGAAAATACTGACGTTGACACAGTAATTACTACTGTAATCGAGAAGTTGTTCGAGACCGGCTCTTTGCAAGAGGCTACTTTCAGACAACTCGAATATACTCAACCACGCACAGGGCAAGATTATATTGACCTCACAGGAGAACCTCATTTTAAAGTGGCCGTCAATGGTGGCGAGAAACGAGAGTTTGAAAGTGACAATATGCGAGTTGCTATCGAGCCATTTGGGCCTAAGAATATCGAGCTCAAATATTATGATCTAAACGATAACGAGCAACAAACACTTATTATCAGAGGCACAAATGTGACTGCAGACCAAACAGAAACAGCAGATAATGGGGTTGTTTACAAGAAGTTCGGCGATGAGTTAGACATCGATGTATCTAATTATGACGGCACCTCTATTTTTAAATTCGCACCGCGAACATGGGAAGTTACTGCGGAAACCAAGAAAACAATTAAAACCAACAAAAAGGTAGTATTGTTATTAAATGCCGACAGCCTACTCAATAATCAAGGCGGTGAGGCAGTACATCAATTCTCTGAACATGAATATGTGGCTAACCCAGAATTGGTAGTGTTCAAATCTCAAACCGATGTATCTGCTGGCACATATATTAGTATCGCTGGTGAGGGTTATCGATTCGGCTATTTCGCTATGGGTGATAGAAGAAACCCATACTTTGTTTGGGATATGAGCCAAAACAAATATGTAAATAGTGCTACAGAAACGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
141c2de634ef18b40869e7dd98e55fd2a0e3d5ad8e9d8e2a489586c21f94c1cf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7962
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50