Protein

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Genbank accession
WPK39115.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MSYNISKSNGTPITVADQTILENYTLPLLGKDISPYGGEIAQSTIRHLENFANAIPPRGAIKGQLWYDTQQEILKVWKGADPLSPNDNTSADRSNEMWTPIGGALIQDLLPKVDNTINIGSPTLRFKNIYAVGFFGTEATLRKCTSSSNRTALTVVGNTSVQGDILPETQSTMPNPCQYITSSSLGSSAKQWDNLYTKKAWINSGGITFTNGSSVIALENGPNNDLFCRGTWIIGGTSYRVTRFFGQDVNTTLLTLGTGTNQGLNSHLMPVIDNTYDLGSTARRYRNMYSVNFVGNASSATNATRAASADKWTFGRTLTLTGNVLGSVVLDGTANVTMNTTVVGLGTAASHDVIAPGVPGNMANKIPVVSTSGVTEIARYLDFHHGTNSSTDYDVRLHTDGVNDGALYINGQRIWHTGNLPTVYTQDQVDQKILTAIAATRELVYPIGSVYINATNSANPATYLGFGVWNPYAQGRSIVGNGSTTDANGDSGGYAAGSTGGTYFHKLTVAEMPAHQHIQGFGNNVSQSGRFGSVGGQSARVEDGYGFQSVTTAPLTSSVGGDGKHNNQSPWQCAYVWIRVG
Physico‐chemical
properties
protein length:581 AA
molecular weight: 61953,03460 Da
isoelectric point:6,59505
aromaticity:0,08606
hydropathy:-0,27194

Domains

Domains [InterPro]
DC_0383
STR
40–581
DC_0383
IPR053827
ATT
442–580
IPR053827
SSF88874
STR
445–578
SSF88874
WPK39115.1
1 581
Architecture
STR
ATT
STR 40-441 | ATT 442-581
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK39115.1
1 581
Domain Start End Length (AA) Confidence
N-terminal 1 330 330 0,3911
Central domain 331 529 200 0,1265
C-terminal 530 581 51 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-330
Central
331-529
C-terminal
530-581

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Cassandra
[NCBI] 		3092175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK39115.1 [NCBI]
Genbank nucleotide accession
OR805292 [NCBI]
CDS location
range 206448 -> 208193
strand -
CDS
ATGTCATATAATATTTCCAAAAGTAACGGCACCCCTATTACTGTTGCAGACCAAACAATATTAGAGAATTATACTTTGCCATTGCTAGGCAAAGACATATCACCATATGGCGGAGAAATAGCACAGAGTACAATTAGGCATTTAGAAAATTTTGCCAATGCAATTCCGCCTCGGGGGGCTATTAAGGGCCAATTGTGGTATGATACCCAGCAGGAAATACTTAAAGTATGGAAAGGAGCAGACCCCCTATCTCCCAACGATAACACTAGTGCAGATAGATCTAACGAAATGTGGACTCCTATCGGCGGAGCATTAATACAAGATCTATTGCCAAAGGTTGATAATACAATTAATATAGGGTCTCCTACACTTAGATTTAAAAATATCTATGCAGTAGGCTTTTTCGGAACAGAAGCAACTTTAAGAAAATGTACATCTAGTTCTAACAGAACTGCTCTTACAGTTGTAGGAAATACTTCAGTTCAAGGTGACATACTACCCGAAACCCAATCGACTATGCCGAACCCTTGTCAGTATATAACATCTTCTAGTTTGGGTTCGTCTGCAAAACAATGGGATAATTTATATACAAAGAAAGCATGGATTAATTCCGGTGGTATAACTTTTACTAATGGTTCTTCTGTTATAGCATTAGAAAACGGTCCTAATAACGATTTATTCTGTAGGGGTACATGGATTATAGGTGGTACTTCATATAGAGTAACAAGATTCTTCGGTCAAGATGTAAATACGACGTTATTAACATTAGGAACTGGCACAAATCAAGGTTTAAATTCTCATTTGATGCCTGTAATAGACAATACGTATGACTTAGGTTCTACTGCTCGGCGCTATAGAAACATGTATTCTGTAAATTTCGTAGGTAATGCATCAAGTGCGACTAATGCAACCAGAGCAGCTTCTGCAGATAAATGGACGTTTGGCAGAACATTAACACTAACTGGAAATGTTTTAGGTTCAGTAGTATTAGACGGTACTGCAAACGTTACAATGAACACAACTGTAGTTGGATTAGGTACGGCAGCGTCACACGATGTTATAGCACCTGGTGTTCCTGGAAATATGGCTAACAAGATTCCTGTTGTTAGTACATCTGGTGTTACAGAAATAGCTAGGTATTTAGATTTTCACCATGGCACAAACTCTTCTACTGATTACGATGTCCGACTGCATACAGATGGCGTAAACGACGGCGCACTATATATAAACGGTCAAAGAATATGGCATACTGGCAATCTTCCTACTGTTTATACCCAAGACCAAGTAGATCAGAAAATTTTAACTGCCATTGCAGCTACTAGAGAATTAGTATATCCCATAGGTTCTGTATACATTAACGCAACTAATTCGGCTAACCCAGCAACTTATTTAGGATTCGGGGTTTGGAATCCGTATGCACAGGGTAGATCTATAGTCGGTAACGGATCTACTACCGATGCAAATGGAGATTCGGGCGGATATGCTGCTGGATCAACAGGAGGAACTTATTTCCATAAACTTACTGTAGCAGAGATGCCAGCACACCAGCATATACAAGGTTTCGGGAATAACGTTTCGCAATCGGGTAGATTCGGTTCAGTTGGAGGTCAATCTGCTAGGGTCGAAGACGGTTACGGATTCCAGAGCGTTACTACAGCGCCTCTAACTTCTTCTGTCGGCGGCGACGGAAAACATAATAACCAATCTCCGTGGCAATGTGCATACGTATGGATTAGGGTAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
769f14b485715fc5080598499c457419cc7f7e40b6eaacf69b159768a07d3987
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. — — GenBank